UW-Madison LOCI
- 40 followers
- Madison, WI, USA
- https://loci.wisc.edu
- @UWMadisonLOCI
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Repositories
- qupath-extension-qpsc Public
Java based extension for QuPath allowing control of a microscope through MicroManager
- microscope_command_server Public
Socket-based command server for remote microscope control and QuPath integration
- qupath-extension-dl-pixel-classifier Public
QuPath extension for deep learning pixel classification with Python training backend
- flamingo-stitcher Public
Standalone light-sheet tile stitching (CLI + GUI) for Flamingo T-SPIM data, extracted from py2flamingo.
- qupath-extension-wizard-wand Public
Enhanced wand tool for QuPath with scroll-wheel sensitivity, dwell expansion, live smoothing, edge-aware selection, and more.
- qupath-extension-polyline-wand Public
Brush/wand-style editor for QuPath line and polyline annotations. Three engines: direct vertex push, area-proxy skeletonize, arc-length displacement field.
- polscope_library Public
Birefringence reconstruction for LC-PolScope microscopes (numpy only, no phase). Ported from waveorder/recOrder.
