Template: Publication workflow

A simple template intended for data processing workflows alongside scientific publications.

This template can be used with copier to initialize a new project structure. Workflows are implemented using snakemake.

Getting started

To use this template:

1. Install copier using pip within a virtual environment

   pip install copier

2. Run the below copier command to create a target directory at path_to_target_folder. Note: copier will overwrite files in the given directory, if it already exists.

   copier copy https://github.com/pyfar/template-publication-workflow path_to_target_folder

3. Open the README.md in the created project directory to get started with your project.

Contributing

Check out pyfar.org if you want to become part of pyfar.