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Remove the deprecated rneat alias (#710) - #821
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rneat was renamed to eidolon in v2.0.0 and the shim was meant to last one transition release. Delete eidolon/src/bin/rneat.rs, stop installing it from the conda recipe, and update the README and docs-site banners. Release binaries never shipped it. Removing a command name is a MAJOR change, so this lands in v4.0.0. Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>
This was referenced Oct 7, 2026
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rneatwas renamed toeidolonin v2.0.0. The alias shim was meant to last one transition release.Versioning: MAJOR. CLI command names are public API under
versioning.md, so this belongs in v4.0.0.Change
eidolon/src/bin/rneat.rs, the shim that warned and forwarded toeidolon. Cargo discovered it automatically fromsrc/bin/, soCargo.tomlneeded no change.conda-recipe/build.shinstalls only--bin eidolon.rust_binaries.yml) never packagedrneat, so release-page users are unaffected. Historical mentions (archived plans, figures, the rename scope doc, theRNEAT_*token tables) describe the past and stay.Migration: invoke
eidoloninstead ofrneat. A binary that is renamed or symlinked torneatstill runs aseidolonthrough the multicall fallback (#794), without the old warning.Evidence
cargo metadatalistseidolonas the package's only binary target.cargo build --bin rneatfails with "no bin target namedrneat", which is what the old--bin rneatin the recipe would now hit.cargo install --no-track --locked --bin eidolon --root …) into a scratch prefix. It produced onlybin/eidolon, andeidolon --versionran.fmt --checkandclippy -D warningspass locally. No test exercised the shim.Not verified
cargo installline. The Bioconda recipe update happens at release.CHANGELOG (Compatibility) line queued on #816.
Closes #710.
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