Striped Unifrac C++ implementation#829
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jepasan wants to merge 53 commits into
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8 errors, 11 warnings, and 1 notice
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Post Run neurogenomics/rworkflows@master
Error: connect ECONNREFUSED 127.0.0.1:7777
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Post Run neurogenomics/rworkflows@master
[Workflow Telemetry] Error
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Post Run neurogenomics/rworkflows@master
[Workflow Telemetry] Unable to report stat collector result
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Post Run neurogenomics/rworkflows@master
Error: connect ECONNREFUSED 127.0.0.1:7777
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Post Run neurogenomics/rworkflows@master
[Workflow Telemetry] Error
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Post Run neurogenomics/rworkflows@master
[Workflow Telemetry] Unable to finish stat collector
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Run neurogenomics/rworkflows@master
The deploy step encountered an error: The process '/usr/bin/git' failed with exit code 128 ❌
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Run neurogenomics/rworkflows@master
$GITHUB_STEP_SUMMARY upload aborted, supports content up to a size of 1024k, got 1431k. For more information see: https://docs.github.com/actions/using-workflows/workflow-commands-for-github-actions#adding-a-markdown-summary
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Complete job
Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: actions/cache@v4, actions/upload-artifact@v4, catchpoint/workflow-telemetry-action@v2. Actions will be forced to run with Node.js 24 by default starting June 16th, 2026. Node.js 20 will be removed from the runner on September 16th, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
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Run neurogenomics/rworkflows@master:
inst/scripts/prepare_ibdmdb.R#L52
[lintr] Indentation should be 4 spaces but is 8 spaces.
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Run neurogenomics/rworkflows@master:
inst/scripts/prepare_ibdmdb.R#L51
[lintr] Indentation should be 2 spaces but is 4 spaces.
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Run neurogenomics/rworkflows@master:
inst/scripts/prepare_ibdmdb.R#L47
[lintr] Lines should not be more than 80 characters. This line is 86 characters.
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Run neurogenomics/rworkflows@master:
inst/scripts/prepare_ibdmdb.R#L27
[lintr] Lines should not be more than 80 characters. This line is 82 characters.
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Run neurogenomics/rworkflows@master:
inst/scripts/prepare_ibdmdb.R#L25
[lintr] Lines should not be more than 80 characters. This line is 84 characters.
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Run neurogenomics/rworkflows@master:
inst/scripts/prepare_ibdmdb.R#L4
[lintr] Remove commented code.
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Run neurogenomics/rworkflows@master:
inst/scripts/import.R#L25
[lintr] Remove trailing whitespace.
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Run neurogenomics/rworkflows@master:
inst/scripts/import.R#L19
[lintr] Indentation should be 2 spaces but is 4 spaces.
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Run neurogenomics/rworkflows@master:
inst/scripts/import.R#L15
[lintr] Indentation should be 4 spaces but is 8 spaces.
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Run neurogenomics/rworkflows@master:
inst/scripts/import.R#L14
[lintr] Indentation should be 2 spaces but is 4 spaces.
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Run neurogenomics/rworkflows@master
Deployment failed! ❌
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