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TreeWASDir
TreeWASDir PublicRepository for our manuscript 'Systematic classification of shared components of genetic risk for common human diseases'.
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DEploid
DEploid PublicForked from DEploid-dev/DEploid
dEploid is designed for deconvoluting mixed genomes with unknown proportions. Traditional ‘phasing’ programs are limited to diploid organisms. Our method modifies Li and Stephen’s algorithm with Ma…
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- msprime Public Forked from tskit-dev/msprime
A reimplementation of Hudson's classical ms simulator for modern data sets.
mcveanlab/msprime’s past year of commit activity - stdpopsim Public Forked from popsim-consortium/stdpopsim
A library of standard simulation models for msprime
mcveanlab/stdpopsim’s past year of commit activity - TreeWASDir Public
Repository for our manuscript 'Systematic classification of shared components of genetic risk for common human diseases'.
mcveanlab/TreeWASDir’s past year of commit activity - DEploid Public Forked from DEploid-dev/DEploid
dEploid is designed for deconvoluting mixed genomes with unknown proportions. Traditional ‘phasing’ programs are limited to diploid organisms. Our method modifies Li and Stephen’s algorithm with Markov chain Monte Carlo (MCMC) approaches, and builds a generic framework that allows haloptype searches in a multiple infection setting.
mcveanlab/DEploid’s past year of commit activity - DEploid-r Public Forked from DEploid-dev/DEploid-r
An R interface for dEploid. dEploid is designed for deconvoluting mixed genomes with unknown proportions. Traditional ‘phasing’ programs are limited to diploid organisms. Our method modifies Li and Stephen’s algorithm with Markov chain Monte Carlo (MCMC) approaches, and builds a generic framework that allows haloptype searches in a multiple infe…
mcveanlab/DEploid-r’s past year of commit activity
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