Wray-Rotation

Rotation Project developing RF models for classifying noncoding functional regulatory elements in the K562 genome using evolutionary data

Name		Name	Last commit message	Last commit date
HiC_data		HiC_data
UCSC_viz		UCSC_viz
X_0011		X_0011
my_scripts/PhyloP		my_scripts/PhyloP
scripts		scripts
CERES.PhyloP.inter.avg.bed		CERES.PhyloP.inter.avg.bed
CERES.PhyloP.placental.inter.avg.bed		CERES.PhyloP.placental.inter.avg.bed
CERES.PhyloP.primates.inter.avg.bed		CERES.PhyloP.primates.inter.avg.bed
CERES_OCRs.bed		CERES_OCRs.bed
Cerbllm_OCRs		Cerbllm_OCRs
Cerbllm_OCRs.bed		Cerbllm_OCRs.bed
Cerbllm_homerResults.html		Cerbllm_homerResults.html
Cerbllm_knownResults.html		Cerbllm_knownResults.html
HOMER.findMotifs.sh		HOMER.findMotifs.sh
ML-Harness-K562.py		ML-Harness-K562.py
ML-Test-Harness.py		ML-Test-Harness.py
OCRsbed.R		OCRsbed.R
README.md		README.md
README_HOMER.txt		README_HOMER.txt
Wray_Rot_Presentation.pptx		Wray_Rot_Presentation.pptx
homerResults.html		homerResults.html
knownResults.html		knownResults.html
x_0012_rf1_cp.R		x_0012_rf1_cp.R

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