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Fixed multi-stage docker build mamba env copy paths #272

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Fixed multi-stage docker build mamba env copy paths #272

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4 changes: 2 additions & 2 deletions Dockerfile
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Original file line number Diff line number Diff line change
Expand Up @@ -40,13 +40,13 @@ ENV ENV_NAME="diffdock"
ENV DIR_NAME="DiffDock"

# Copy the Conda environment and application code from the builder stage
COPY --from=builder --chown=$APPUSER:$APPUSER $HOME/micromamba $HOME/micromamba
COPY --from=builder --chown=$APPUSER:$APPUSER $HOME/.local/share/mamba $HOME/.local/share/mamba
COPY --from=builder --chown=$APPUSER:$APPUSER $HOME/bin $HOME/bin
COPY --from=builder --chown=$APPUSER:$APPUSER $HOME/$DIR_NAME $HOME/$DIR_NAME
WORKDIR $HOME/$DIR_NAME

# Set the environment variables
ENV MAMBA_ROOT_PREFIX=$HOME/micromamba
ENV MAMBA_ROOT_PREFIX=$HOME/.local/share/mamba
ENV PATH=$HOME/bin:$HOME/.local/bin:$PATH
RUN micromamba shell init -s bash --root-prefix $MAMBA_ROOT_PREFIX

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