Bump dependencies to latest compatible versions

[AndrewSazonov]

No description provided.

[codecov]

Codecov Report

✅ All modified and coverable lines are covered by tests.
✅ Project coverage is 82.93%. Comparing base (85def95) to head (45a267b).
⚠️ Report is 1 commits behind head on develop.

Additional details and impacted files

@@           Coverage Diff            @@
##           develop     #123   +/-   ##
========================================
  Coverage    82.93%   82.93%           
========================================
  Files           89       89           
  Lines         5461     5461           
  Branches       453      453           
========================================
  Hits          4529     4529           
  Misses         761      761           
  Partials       171      171           

Flag	Coverage Δ
integration	68.52% <ø> (ø)
unittests	73.48% <ø> (ø)

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[Copilot]

Pull request overview

This PR updates project dependencies to their latest compatible versions by removing previously imposed version constraints and updating development tools. The changes address compatibility issues that have been resolved in newer versions of the affected packages.

• Removes numpy version constraint (previously capped at <2.4 for cryspy 0.9.x compatibility)
• Removes mkdocs-autorefs version constraint (previously capped at <1.3.0 to avoid deprecation warnings)
• Removes macOS-specific h5py workaround (version 3.14.0 pinning to avoid broken 3.15.0 wheel)
• Updates setup-pixi GitHub Action from v0.9.0 to v0.9.3 across all workflows

Reviewed changes

Copilot reviewed 11 out of 12 changed files in this pull request and generated 1 comment.

Show a summary per file

File	Description
pyproject.toml	Removes version constraints from numpy and mkdocs-autorefs dependencies, allowing latest compatible versions
pixi.toml	Removes macOS h5py workaround and adds --force-reinstall flag to dev-install command
.github/workflows/tutorial-tests.yaml	Updates setup-pixi action to v0.9.3
.github/workflows/test.yaml	Updates setup-pixi action to v0.9.3 in two job steps
.github/workflows/release-notes.yaml	Updates setup-pixi action to v0.9.3
.github/workflows/quality.yaml	Updates setup-pixi action to v0.9.3
.github/workflows/pypi-test.yaml	Updates setup-pixi action to v0.9.3
.github/workflows/pypi-publish.yaml	Updates setup-pixi action to v0.9.3
.github/workflows/docs.yaml	Updates setup-pixi action to v0.9.3
.github/workflows/dashboard.yaml	Updates setup-pixi action to v0.9.3
.github/workflows/coverage.yaml	Updates setup-pixi action to v0.9.3 in three job steps

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