Skip to content
Navigation Menu
Sign in
Appearance settings
Platform
AI CODE CREATION
GitHub Copilot
Write better code with AI
GitHub Copilot app
Direct agents from issue to merge
MCP Registry
Integrate external tools
DEVELOPER WORKFLOWS
Actions
Automate any workflow
Codespaces
Instant dev environments
Issues
Plan and track work
Code Review
Manage code changes
Code Quality
Enforce quality at merge
APPLICATION SECURITY
GitHub Advanced Security
Find and fix vulnerabilities
Code security
Secure your code as you build
Secret protection
Stop leaks before they start
EXPLORE
Why GitHub
Documentation
Blog
Changelog
Marketplace
View all features
Solutions
BY COMPANY SIZE
Enterprises
Small and medium teams
Startups
Nonprofits
BY USE CASE
App Modernization
DevSecOps
DevOps
CI/CD
View all use cases
BY INDUSTRY
Healthcare
Financial services
Manufacturing
Government
View all industries
View all solutions
Resources
EXPLORE BY TOPIC
AI
Software Development
DevOps
Security
View all topics
EXPLORE BY TYPE
Customer stories
Events & webinars
Ebooks & reports
Business insights
GitHub Skills
SUPPORT & SERVICES
Documentation
Customer support
Community forum
Trust center
Partners
View all resources
Open Source
COMMUNITY
GitHub Sponsors
Fund open source developers
PROGRAMS
Security Lab
Maintainer Community
Accelerator
GitHub Stars
Archive Program
REPOSITORIES
Topics
Trending
Collections
Enterprise
ENTERPRISE SOLUTIONS
Enterprise platform
AI-powered developer platform
AVAILABLE ADD-ONS
GitHub Advanced Security
Enterprise-grade security features
Copilot for Business
Enterprise-grade AI features
Premium Support
Enterprise-grade 24/7 support
Pricing
Search
/
Sign in
Sign up
Appearance settings
You signed in with another tab or window.
Reload
to refresh your session.
You signed out in another tab or window.
Reload
to refresh your session.
You switched accounts on another tab or window.
Reload
to refresh your session.
Dismiss alert
{{ message }}
Uh oh!
There was an error while loading.
Please reload this page
.
cbg-ethz
/
scDEF
Public
Notifications
You must be signed in to change notification settings
Fork
1
Star
21
Code
Issues
0
Pull requests
2
Actions
Projects
Security and quality
0
Insights
Additional navigation options
Code
Issues
Pull requests
Actions
Projects
Security and quality
Insights
Actions: cbg-ethz/scDEF
Actions
All workflows
Workflows
CI
CI
Dependabot Updates
Dependabot Updates
Dependency Graph
Dependency Graph
Docs
Docs
Nightly
Nightly
pages-build-deployment
pages-build-deployment
Release
Release
Show more workflows...
Management
Caches
Deployments
All workflows
All workflows
Actions
Loading...
Loading
Sorry, something went wrong.
Uh oh!
There was an error while loading.
Please reload this page
.
will be ignored since log searching is not yet available
Showing runs from all workflows
will be ignored since log searching is not yet available
250 workflow runs
250 workflow runs
Workflow
Filter by Workflow
Sorry, something went wrong.
Filter
Loading
Sorry, something went wrong.
No matching workflows.
Event
Filter by Event
Sorry, something went wrong.
Filter
Loading
Sorry, something went wrong.
No matching events.
Status
Filter by Status
Sorry, something went wrong.
Filter
Loading
Sorry, something went wrong.
No matching statuses.
Branch
Filter by Branch
Sorry, something went wrong.
Filter
Loading
Sorry, something went wrong.
No matching branches.
Actor
Filter by Actor
Sorry, something went wrong.
Filter
Loading
Sorry, something went wrong.
No matching users.
Nightly
Nightly
#8:
Scheduled
1h 0m 6s
main
main
1h 0m 6s
View workflow file
Nightly
Nightly
#7:
Scheduled
26m 52s
main
main
26m 52s
View workflow file
pip in / for optax, anndata, click, tqdm, graphviz, igraph, decoupler, setuptools, gseapy, black, pytest, mkdocs-material, mkdocs-jupyter, mkdocstrings, mkdocstrings-python, notebook - Update #1529130085
Dependabot Updates
#9:
by
dependabot
Bot
14m 37s
dev
dev
14m 37s
github_actions in / for actions/checkout, actions/setup-python, actions/cache, actions/upload-pages-artifact, actions/deploy-pages - Update #1529130076
Dependabot Updates
#8:
by
dependabot
Bot
1m 32s
dev
dev
1m 32s
github_actions in /. - Update #1529129980
Dependabot Updates
#7:
by
dependabot
Bot
38s
dev
dev
38s
pip in /. - Update #1529129992
Dependabot Updates
#6:
by
dependabot
Bot
52s
dev
dev
52s
Nightly
Nightly
#6:
Scheduled
1h 5m 9s
main
main
1h 5m 9s
View workflow file
Nightly
Nightly
#5:
Scheduled
1h 5m 4s
main
main
1h 5m 4s
View workflow file
Nightly
Nightly
#4:
Scheduled
1h 5m 10s
main
main
1h 5m 10s
View workflow file
Nightly
Nightly
#3:
Scheduled
26m 3s
main
main
26m 3s
View workflow file
Replace the tutorial notebooks with the re-run versions
CI
#21:
Commit
6c97ee5
pushed by
pedrofale
5m 58s
dev
dev
5m 58s
View workflow file
Nightly
Nightly
#2:
Scheduled
59m 7s
main
main
59m 7s
View workflow file
Fuse the per-minibatch training step into a single jit
CI
#20:
Commit
6a2e04f
pushed by
pedrofale
6m 1s
dev
dev
6m 1s
View workflow file
Use the hierarchical initialization by default
CI
#19:
Commit
bc93012
pushed by
pedrofale
7m 4s
dev
dev
7m 4s
View workflow file
Survive unannotated cells; stop invalidating signatures on a flag change
CI
#18:
Commit
1f1cd5c
pushed by
pedrofale
2m 6s
dev
dev
2m 6s
View workflow file
Nightly
Nightly
#1:
Scheduled
29m 39s
main
main
29m 39s
View workflow file
Merge pull request #18 from cbg-ethz/dev
Release
#2:
Commit
0480303
pushed by
pedrofale
10m 5s
v0.7.0
v0.7.0
10m 5s
View workflow file
Merge pull request #18 from cbg-ethz/dev
Docs
#2:
Commit
0480303
pushed by
pedrofale
49s
main
main
49s
View workflow file
Merge pull request #18 from cbg-ethz/dev
CI
#17:
Commit
0480303
pushed by
pedrofale
5m 57s
main
main
5m 57s
View workflow file
github_actions in / for actions/checkout, actions/setup-python, actions/cache, actions/upload-pages-artifact, actions/deploy-pages - Update #1520531045
Dependabot Updates
#5:
by
dependabot
Bot
1m 3s
dev
dev
1m 3s
View #18
Docs highlighting + release guard fix
CI
#16:
Pull request
#18
opened by
pedrofale
7m 3s
dev
dev
7m 3s
View #18
View workflow file
Fix the release guard: git fetch rejects --depth=0
CI
#15:
Commit
296e84f
pushed by
pedrofale
7m 45s
dev
dev
7m 45s
View #18
View workflow file
Enable syntax highlighting in the markdown docs
CI
#14:
Commit
b02d0bc
pushed by
pedrofale
3m 8s
dev
dev
3m 8s
View workflow file
Bump version: 0.6.1 → 0.7.0
Release
#1:
Commit
c8c4865
pushed by
pedrofale
12s
v0.7.0
v0.7.0
12s
View workflow file
Graph Update: pip in /. #1520515472
Dependency Graph
#8:
by
dependabot
Bot
1m 0s
main
main
1m 0s
Previous
1
2
3
4
5
…
9
10
Next
You can’t perform that action at this time.