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13 changes: 12 additions & 1 deletion .gitignore
Original file line number Diff line number Diff line change
Expand Up @@ -5,4 +5,15 @@
.DS_Store
docs/Manifest.toml
test/Manifest.toml
docs/build/
docs/build/

# DocumenterVitepress:
docs/src/.vitepress/cache
docs/src/.vitepress/dist
docs/Manifest.toml
docs/.vscode
docs/node_modules
docs/.vitepress/cache
docs/.vitepress/dist
docs/.DS_Store
docs/package-lock.json
1 change: 1 addition & 0 deletions docs/Project.toml
Original file line number Diff line number Diff line change
Expand Up @@ -3,6 +3,7 @@ CSV = "336ed68f-0bac-5ca0-87d4-7b16caf5d00b"
CairoMakie = "13f3f980-e62b-5c42-98c6-ff1f3baf88f0"
DataFrames = "a93c6f00-e57d-5684-b7b6-d8193f3e46c0"
Documenter = "e30172f5-a6a5-5a46-863b-614d45cd2de4"
DocumenterVitepress = "4710194d-e776-4893-9690-8d956a29c365"
MultiScaleTreeGraph = "dd4a991b-8a45-4075-bede-262ee62d5583"
PlantMeteo = "4630fe09-e0fb-4da5-a846-781cb73437b6"
PlantSimEngine = "9a576370-710b-4269-adf9-4f603a9c6423"
16 changes: 7 additions & 9 deletions docs/make.jl
Original file line number Diff line number Diff line change
@@ -1,7 +1,7 @@
using PlantSimEngine
using PlantMeteo
using DataFrames, CSV
using Documenter
using Documenter, DocumenterVitepress
using CairoMakie

DocMeta.setdocmeta!(PlantSimEngine, :DocTestSetup, :(using PlantSimEngine, PlantMeteo, DataFrames, CSV, CairoMakie); recursive=true)
Expand All @@ -11,12 +11,9 @@ makedocs(;
authors="Rémi Vezy <[email protected]> and contributors",
repo=Documenter.Remotes.GitHub("VirtualPlantLab", "PlantSimEngine.jl"),
sitename="PlantSimEngine.jl",
format=Documenter.HTML(;
prettyurls=get(ENV, "CI", "false") == "true",
canonical="https://VirtualPlantLab.github.io/PlantSimEngine.jl",
edit_link="main",
assets=String[],
size_threshold=300000
format=DocumenterVitepress.MarkdownVitepress(;
repo="https://github.com/VirtualPlantLab/PlantSimEngine.jl",
# build_vitepress=false
),
pages=[
"Home" => "index.md",
Expand All @@ -37,12 +34,13 @@ makedocs(;
],
"Modelers" => "./model_coupling/model_coupling_modeler.md",
],
"FAQ" => ["./FAQ/translate_a_model.md"],
"FAQ" => ["Translate a model" => "./FAQ/translate_a_model.md"],
"API" => "API.md",
]
)

deploydocs(;
repo="github.com/VirtualPlantLab/PlantSimEngine.jl.git",
devbranch="main"
devbranch="main",
push_preview=true, # Visit https://VirtualPlantLab.github.io/PlantSimEngine.jl/previews/PR## to visualize the preview
)
5 changes: 0 additions & 5 deletions docs/src/index.md
Original file line number Diff line number Diff line change
Expand Up @@ -38,11 +38,6 @@ run!(model2, meteo_day)
[![DOI](https://zenodo.org/badge/571659510.svg)](https://zenodo.org/badge/latestdoi/571659510)
[![JOSS](https://joss.theoj.org/papers/137e3e6c2ddc349bec39e06bb04e4e09/status.svg)](https://joss.theoj.org/papers/137e3e6c2ddc349bec39e06bb04e4e09)

```@contents
Pages = ["index.md"]
Depth = 5
```

## Overview

`PlantSimEngine` is a comprehensive package for simulating and modelling plants, soil and atmosphere. It provides tools to **prototype, evaluate, test, and deploy** plant/crop models at any scale. At its core, PlantSimEngine is designed with a strong emphasis on performance and efficiency.
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