New hint nc_data_move_chunk_size

.github/workflows/mac_mpich.yml

@@ -32,7 +32,7 @@ env:
 jobs:
     build:
       runs-on: macos-latest
-      timeout-minutes: 90
+      timeout-minutes: 120
       steps:
         - uses: actions/checkout@v4
         - name: Set up dependencies
@@ -115,7 +115,6 @@ jobs:
                         --with-pthread \
                         --disable-fortran \
                         --with-mpi=${GITHUB_WORKSPACE}/MPICH \
-                        MIMIC_LUSTRE=yes \
                         TESTOUTDIR=${GITHUB_WORKSPACE}/pnetcdf_output
             make -j 8 tests
         - name: Print config.log
@@ -142,42 +141,6 @@ jobs:
           run: |
             cd ${GITHUB_WORKSPACE}
             make ptests
-        - name: Build PnetCDF (default configuration)
-          run: |
-            cd ${GITHUB_WORKSPACE}
-            export PATH="${GITHUB_WORKSPACE}/AUTOTOOLS/bin:${PATH}"
-            export LD_LIBRARY_PATH="${GITHUB_WORKSPACE}/AUTOTOOLS/lib:${LD_LIBRARY_PATH}"
-            make distclean
-            rm -rf pnetcdf_output
-            mkdir -p pnetcdf_output
-            ./configure --disable-fortran \
-                        --with-mpi=${GITHUB_WORKSPACE}/MPICH \
-                        TESTOUTDIR=${GITHUB_WORKSPACE}/pnetcdf_output
-            make -j 8 tests
-        - name: Print config.log (default configuration)
-          if: ${{ always() }}
-          run: |
-            cat ${GITHUB_WORKSPACE}/config.log
-        - name: make check (default configuration)
-          run: |
-            cd ${GITHUB_WORKSPACE}
-            make check
-        - name: Print test log files (default configuration)
-          if: ${{ always() }}
-          run: |
-            cd ${GITHUB_WORKSPACE}
-            fname=`find src test examples benchmarks -type f -name "*.log"`
-            for f in $fname ; do \
-               bname=`basename $f` ; \
-               if test "x$bname" != xconfig.log ; then \
-                  echo "-------- dump $f ----------------------------" ; \
-                  cat $f ; \
-               fi ; \
-            done
-        - name: make ptests (default configuration)
-          run: |
-            cd ${GITHUB_WORKSPACE}
-            make ptests
         - name: make distcheck
           run: |
             cd ${GITHUB_WORKSPACE}

.github/workflows/mac_mpich_lustre.yml

@@ -0,0 +1,170 @@
+name: Mac OSX with MPICH (MIMIC_LUSTRE)
+
+on:
+  push:
+    branches: [ master, test_github_actions ]
+    paths-ignore:
+      - '**/*.md'
+      - '**/*.txt'
+      - '**/*.1'
+      - '**/*.jpg'
+      - '**/*.png'
+      - 'docs/*'
+      - 'test/test_installed/*'
+  pull_request:
+    branches: [ master, test_github_actions ]
+    paths-ignore:
+      - '**/*.md'
+      - '**/*.txt'
+      - '**/*.1'
+      - '**/*.jpg'
+      - '**/*.png'
+      - 'docs/*'
+      - 'test/test_installed/*'
+
+env:
+   MPICH_VERSION: 4.3.0
+   AUTOCONF_VERSION: 2.71
+   AUTOMAKE_VERSION: 1.17
+   LIBTOOL_VERSION: 2.5.4
+   M4_VERSION: 1.4.19
+
+jobs:
+    build:
+      runs-on: macos-latest
+      timeout-minutes: 120
+      steps:
+        - uses: actions/checkout@v4
+        - name: Set up dependencies
+          run: |
+            # brew install gcc
+            # which gcc
+            # gcc --version
+            # which gfortran
+        - name: Clean up git untracked files
+          run: |
+            git clean -fx
+        - name: Build GNU autotools
+          run: |
+            export PATH="${GITHUB_WORKSPACE}/AUTOTOOLS/bin:${PATH}"
+            export LD_LIBRARY_PATH="${GITHUB_WORKSPACE}/AUTOTOOLS/lib:${LD_LIBRARY_PATH}"
+            cd ${GITHUB_WORKSPACE}
+            wget -q https://ftp.gnu.org/gnu/m4/m4-${M4_VERSION}.tar.gz
+            gzip -dc m4-${M4_VERSION}.tar.gz | tar -xf -
+            cd m4-${M4_VERSION}
+            ./configure --prefix=${GITHUB_WORKSPACE}/AUTOTOOLS \
+                        --silent
+            make -s -j 8 install > qout 2>&1
+            make -s -j 8 distclean >> qout 2>&1
+            cd ${GITHUB_WORKSPACE}
+            wget -q https://ftp.gnu.org/gnu/autoconf/autoconf-${AUTOCONF_VERSION}.tar.gz
+            gzip -dc autoconf-${AUTOCONF_VERSION}.tar.gz | tar -xf -
+            cd autoconf-${AUTOCONF_VERSION}
+            ./configure --prefix=${GITHUB_WORKSPACE}/AUTOTOOLS \
+                        --silent
+            make -s -j 8 install > qout 2>&1
+            make -s -j 8 distclean >> qout 2>&1
+            cd ${GITHUB_WORKSPACE}
+            wget -q https://ftp.gnu.org/gnu/automake/automake-${AUTOMAKE_VERSION}.tar.gz
+            gzip -dc automake-${AUTOMAKE_VERSION}.tar.gz | tar -xf -
+            cd automake-${AUTOMAKE_VERSION}
+            ./configure --prefix=${GITHUB_WORKSPACE}/AUTOTOOLS \
+                        --silent
+            make -s -j 8 install > qout 2>&1
+            make -s -j 8 distclean >> qout 2>&1
+            cd ${GITHUB_WORKSPACE}
+            wget -q https://ftp.gnu.org/gnu/libtool/libtool-${LIBTOOL_VERSION}.tar.gz
+            gzip -dc libtool-${LIBTOOL_VERSION}.tar.gz | tar -xf -
+            cd libtool-${LIBTOOL_VERSION}
+            ./configure --prefix=${GITHUB_WORKSPACE}/AUTOTOOLS \
+                        --silent
+            make -s -j 8 install > qout 2>&1
+            make -s -j 8 distclean >> qout 2>&1
+        - name: Build MPICH
+          run: |
+            cd ${GITHUB_WORKSPACE}
+            rm -rf MPICH ; mkdir MPICH ; cd MPICH
+            wget -q https://www.mpich.org/static/downloads/${MPICH_VERSION}/mpich-${MPICH_VERSION}.tar.gz
+            gzip -dc mpich-${MPICH_VERSION}.tar.gz | tar -xf -
+            cd mpich-${MPICH_VERSION}
+            ./configure --prefix=${GITHUB_WORKSPACE}/MPICH \
+                        --silent \
+                        --enable-romio \
+                        --with-file-system=ufs \
+                        --with-device=ch3:sock \
+                        --disable-fortran \
+                        CC=gcc
+            make -s LIBTOOLFLAGS=--silent V=1 -j 8 install > qout 2>&1
+            make -s -j 8 distclean >> qout 2>&1
+        - name: Build PnetCDF with MIMIC_LUSTRE
+          run: |
+            cd ${GITHUB_WORKSPACE}
+            export PATH="${GITHUB_WORKSPACE}/AUTOTOOLS/bin:${PATH}"
+            export LD_LIBRARY_PATH="${GITHUB_WORKSPACE}/AUTOTOOLS/lib:${LD_LIBRARY_PATH}"
+            m4 --version
+            autoconf --version
+            automake --version
+            libtool --version
+            autoreconf -i
+            mkdir -p pnetcdf_output
+            ./configure --enable-option-checking=fatal \
+                        pnc_ac_debug=yes \
+                        --enable-burst_buffering \
+                        --enable-subfiling \
+                        --enable-thread-safe \
+                        --with-pthread \
+                        --disable-fortran \
+                        --with-mpi=${GITHUB_WORKSPACE}/MPICH \
+                        TESTOUTDIR=${GITHUB_WORKSPACE}/pnetcdf_output \
+                        MIMIC_LUSTRE=yes
+            make -j 8 tests
+        - name: Print config.log
+          if: ${{ always() }}
+          run: |
+            cat ${GITHUB_WORKSPACE}/config.log
+        - name: make check
+          run: |
+            cd ${GITHUB_WORKSPACE}
+            make check
+        - name: Print test log files
+          if: ${{ always() }}
+          run: |
+            cd ${GITHUB_WORKSPACE}
+            fname=`find src test examples benchmarks -type f -name "*.log"`
+            for f in $fname ; do \
+               bname=`basename $f` ; \
+               if test "x$bname" != xconfig.log ; then \
+                  echo "-------- dump $f ----------------------------" ; \
+                  cat $f ; \
+               fi ; \
+            done
+        - name: make ptests
+          run: |
+            cd ${GITHUB_WORKSPACE}
+            make ptests
+        - name: make distcheck
+          run: |
+            cd ${GITHUB_WORKSPACE}
+            make -j 8 distcheck DISTCHECK_CONFIGURE_FLAGS="--silent --with-mpi=${GITHUB_WORKSPACE}/MPICH"
+        - name: make install
+          run: |
+            cd ${GITHUB_WORKSPACE}
+            prefix_path=${GITHUB_WORKSPACE}/pnetcdf_install
+            echo "---- test make install prefix=${prefix_path}"
+            make install prefix=${prefix_path}
+            test/tst_install.sh ${prefix_path}
+            prefix_path="/pnetcdf_install"
+            destdir_path=${GITHUB_WORKSPACE}/inst
+            echo "---- test make install prefix=${prefix_path} DESTDIR=${destdir_path}"
+            make install prefix=${prefix_path} DESTDIR=${destdir_path}
+            test/tst_install.sh ${prefix_path} ${destdir_path}
+        - name: Cleanup
+          if: ${{ always() }}
+          run: |
+            cd ${GITHUB_WORKSPACE}
+            make -s distclean
+            rm -rf ${GITHUB_WORKSPACE}/pnetcdf_output
+            rm -rf ${GITHUB_WORKSPACE}/MPICH
+            rm -rf ${GITHUB_WORKSPACE}/pnetcdf_install
+            rm -rf ${GITHUB_WORKSPACE}/inst
+

.github/workflows/mac_openmpi.yml

@@ -32,7 +32,7 @@ env:
 jobs:
     build:
       runs-on: macos-latest
-      timeout-minutes: 90
+      timeout-minutes: 120
       steps:
         - uses: actions/checkout@v4
         - name: Set up dependencies
@@ -117,7 +117,6 @@ jobs:
                         --with-pthread \
                         --disable-fortran \
                         --with-mpi=${GITHUB_WORKSPACE}/OPENMPI \
-                        MIMIC_LUSTRE=yes \
                         TESTOUTDIR=${GITHUB_WORKSPACE}/pnetcdf_output
             make -j 8 tests
         - name: Print config.log
@@ -144,42 +143,6 @@ jobs:
           run: |
             cd ${GITHUB_WORKSPACE}
             make ptests
-        - name: Build PnetCDF (default configuration)
-          run: |
-            cd ${GITHUB_WORKSPACE}
-            export PATH="${GITHUB_WORKSPACE}/AUTOTOOLS/bin:${PATH}"
-            export LD_LIBRARY_PATH="${GITHUB_WORKSPACE}/AUTOTOOLS/lib:${LD_LIBRARY_PATH}"
-            make distclean
-            rm -rf  pnetcdf_output
-            mkdir -p pnetcdf_output
-            ./configure --disable-fortran \
-                        --with-mpi=${GITHUB_WORKSPACE}/OPENMPI \
-                        TESTOUTDIR=${GITHUB_WORKSPACE}/pnetcdf_output
-            make -j 8 tests
-        - name: Print config.log (default configuration)
-          if: ${{ always() }}
-          run: |
-            cat ${GITHUB_WORKSPACE}/config.log
-        - name: make check (default configuration)
-          run: |
-            cd ${GITHUB_WORKSPACE}
-            make check
-        - name: Print test log files (default configuration)
-          if: ${{ always() }}
-          run: |
-            cd ${GITHUB_WORKSPACE}
-            fname=`find src test examples benchmarks -type f -name "*.log"`
-            for f in $fname ; do \
-               bname=`basename $f` ; \
-               if test "x$bname" != xconfig.log ; then \
-                  echo "-------- dump $f ----------------------------" ; \
-                  cat $f ; \
-               fi ; \
-            done
-        - name: make ptests (default configuration)
-          run: |
-            cd ${GITHUB_WORKSPACE}
-            make ptests
         - name: make distcheck
           run: |
             cd ${GITHUB_WORKSPACE}