Update Encyclopedia from Develop - #268

Open

msfitzsimons wants to merge 312 commits into

encyclopediafrom

This pull request is big! We're only showing the most recent 250 commits

Commits on Feb 7, 2018

Fox release update
purplepeopleeater
committed
0b5769c
Survival Analysis Import

Colin Reid
authored and
Colin Reid
committed
cc71d74
Fox release update
purplepeopleeater
committed
82a2a25
Fox image update
purplepeopleeater
committed
3f36f25
Fox updates
purplepeopleeater
committed
82957ae
Image update fox release
purplepeopleeater
committed
39bd488
Fox release updates
purplepeopleeater
committed
88d8024

Commits on Feb 8, 2018

Update Data_Portal_Release_Notes.md
phuongmy
authored
6cb7856
Fox release updates
purplepeopleeater
committed
a02bf6b
Fox release update
purplepeopleeater
committed
f5a8ccc
Added Data version 10.1 update
msfitzsimons
committed
a35f32d
Fox release updates
purplepeopleeater
committed
7682211
Doc update for fox release
purplepeopleeater
committed
eae5928
Updates for fox release
purplepeopleeater
committed
f9be2f1
Fox release update
purplepeopleeater
committed
19570f2
Update fox release
purplepeopleeater
committed
6acd88c
Rename image
purplepeopleeater
committed
f71e7cf
Fox updates add back in summary page
purplepeopleeater
committed
14d17f1
small typo in UG
msfitzsimons
committed
15b868d
Merge pull request #246 from NCIP/Fox_release
msfitzsimons
authored
13264c9

Commits on Feb 9, 2018

Updating nodes docs
wwysoc2
committed
b6848f2
Updated images for fox release
purplepeopleeater
committed
b197153

Commits on Feb 15, 2018

Changed Release Notes Dates
wwysoc2
committed
8523629

Commits on Feb 16, 2018

Minor update to release notes
msfitzsimons
committed
06311a5

Commits on Mar 6, 2018

Updated Tables
cpreid2
committed
9a13a82
Fixed Release Notes Pages
cpreid2
committed
d5f97c7

Commits on Mar 22, 2018

SV-1017 broken links updates
msfitzsimons
committed
5ee18e7

Commits on Mar 26, 2018

Update Data_Portal_Release_Notes.md
phuongmy
authored
582b2b5
Update Data_Submission_Portal_Release_Notes.md
phuongmy
authored
469a8f7
Update Data_Portal_Release_Notes.md
phuongmy
authored
2ecea2a
target capture kit q and a
msfitzsimons
committed
1f223ec
Release Notes
cpreid2
committed
c178e58
data release notes update
msfitzsimons
committed
b1fe260
API release notes
msfitzsimons
committed
1079128
Add files via upload
phuongmy
authored
d86c2f5
Add files via upload
phuongmy
authored
aaa449e
Update Data_Portal_UG.yml
Fgerthoffert
authored
2cb8635
Added GDCMVS app to gdc-docs
fmanuelos
committed
8a27d33

Commits on Mar 29, 2018

Update Getting_Started.md
phuongmy
authored
782894a
Update Image_viewer.md
phuongmy
authored
3bd393c
Add files via upload
phuongmy
authored
7fe38cf

Commits on Apr 4, 2018

Update Data_Submission_Portal_Release_Notes.md
phuongmy
authored
43321d6

Commits on Apr 5, 2018

Merge pull request #249 from NCIP/develop
msfitzsimons
authored
031f30e
DTT UI release notes update
msfitzsimons
committed
95103da
DTT UI Release notes update
msfitzsimons
committed
49d21e4

Commits on Apr 6, 2018

Release Notes
cpreid2
committed
45e6282

Commits on Apr 10, 2018

Add files via upload
phuongmy
authored
a56026e
:sparkles: DOC-76 hide deprecated enums and properties
cy
committed
b16825c
:sparkles: DOC-75 display list of true, false for boolean
cy
committed
75b4080

Commits on Apr 11, 2018

Updates to release notes
cpreid2
committed
ccac310
Merge pull request #253 from NCIP/Horton
msfitzsimons
authored
61630b7

Commits on Apr 12, 2018

DOC-96 hide batch_id
cy
committed
3382dbc

Commits on Apr 13, 2018

Release notes update for Horton Release
msfitzsimons
committed
abc5e5a

Commits on Apr 18, 2018

Added localStorage to GDCMVS app
fmanuelos
committed
ba256ae
Changed modified to added for molecular_test node
wwysoc2
committed
8ad8560

Commits on Apr 20, 2018

Data release notes update
msfitzsimons
committed
0b129d8
Modified data model images in submission docs to match new dictionary
wwysoc2
committed
470a323
Merge branch 'develop' of https://github.com/NCIP/gdc-docs into develop
wwysoc2
committed
4788d10

Commits on Apr 23, 2018

Merge branch 'develop' into Gack
msfitzsimons
committed
6249fc8

Commits on Apr 24, 2018

remove GDC cBioPortal from Encyclopedia
msfitzsimons
committed
09e66b6

Commits on Apr 26, 2018

Encyclopedia updates
msfitzsimons
committed
72c355b
Fixing Horton to Gack merge issues
msfitzsimons
committed
2ee7a46

Commits on May 4, 2018

TARGET NBL bug added to release notes
msfitzsimons
committed
d910e72
Add slides to case tab description
rosibaj
authored
e2e0848
Add files via upload
rosibaj
authored
678099c
Add files via upload
rosibaj
authored
8cf8383
case-table update
rosibaj
authored
675da8f
update file navigation image
rosibaj
authored
58a9bea
update input set image
rosibaj
authored
f4ea7c9
Update images/text for Exploration page docs
rosibaj
authored
83ec53b
Merge pull request #256 from rosibaj/patch-1
rosibaj
authored
d032b19
TARGET NBL release notes update
msfitzsimons
committed
44fcd14
Add files via upload
rosibaj
authored
d4dd74b
update project page screenshot
rosibaj
authored
1787135

Commits on May 8, 2018

Change position for preventDefault function
fmanuelos
committed
5d0b8cd

Commits on May 10, 2018

TCGA Barcode Page
msfitzsimons
committed
68c5218
Back Release Notes Updates
msfitzsimons
committed
b9e7a41
Merge branch 'develop' into Gack
msfitzsimons
committed
a1fff90
Gack release notes update
msfitzsimons
committed
3befb79
Gack updates
msfitzsimons
committed
ad050b2
TCGA Barcode page
msfitzsimons
committed
69d38c2

Commits on May 11, 2018

Update to Submission Workflow diagrams
msfitzsimons
committed
f696d63

Commits on May 14, 2018

Add files via upload
rosibaj
authored
36b0ce0
Add files via upload
rosibaj
authored
864b9e6
Add files via upload
rosibaj
authored
cc6199b
Update Browse_Data.md
rosibaj
authored
9d676cf
Merge pull request #258 from NCIP/Gack
msfitzsimons
authored
5d64fe9
back minor update
msfitzsimons
committed
78f2f7c
Minor Gack updates
msfitzsimons
committed
6207c44
Minor Gack update
msfitzsimons
committed
ef8153c
Minor Gack updates for DTT UI release notes
msfitzsimons
committed
32315b9

Commits on May 15, 2018

Back Release Notes updates
msfitzsimons
committed
852b0c4

Commits on May 21, 2018

Commits on May 29, 2018

Merge pull request #252 from NCIP/gdcmvs
Fgerthoffert
authored
0bd55db

Commits on May 30, 2018

Ish Release Notes and footer link update
msfitzsimons
committed
13bb829

Commits on May 31, 2018

Corrected two typos
wwysoc2
committed
3954f34

Commits on Jun 4, 2018

Ish Release Notes
msfitzsimons
committed
0f9015c

Commits on Jun 5, 2018

Commits on Jun 6, 2018

Updated data portal release notes for 1.14
rosibaj
authored
c709dae

Commits on Jun 11, 2018

Ish Release Notes Date updates
msfitzsimons
committed
7ebee37
Added release notes from ORR
wwysoc2
committed
9d65324
Added SNP6 probeset information
wwysoc2
committed
18553e0

Commits on Jun 12, 2018

Submission doc update
purplepeopleeater
committed
2141bfe
Merge pull request #264 from NCIP/Ish
msfitzsimons
authored
74a7c5b
manifest and swap files for Ish
msfitzsimons
committed
3ff0828

Commits on Jun 13, 2018

date updates
msfitzsimons
committed
a0571b2
changed file names
msfitzsimons
committed
4dfaf55

Commits on Jun 14, 2018

minor release notes update
msfitzsimons
committed
9712e4c

Commits on Jun 18, 2018

AWG Docs
msfitzsimons
committed
eb2cc0b
AWG docs updates
msfitzsimons
committed
4a13a45

Commits on Jun 19, 2018

Remove general portal features from the Pre-release portal user guide
msfitzsimons
committed
6408223
AWG UG updates
msfitzsimons
committed
f2b52db
API URL name updated
msfitzsimons
committed
1bcd688

Commits on Jun 20, 2018

Added DTT Flag
msfitzsimons
committed
30f3f08

Commits on Jun 24, 2018

Removing general GDC Data Portal content from AWG UG
msfitzsimons
committed
6c4dcd4

Commits on Jun 27, 2018

Added pre-release data portal release notes
msfitzsimons
committed
2ed0309

Commits on Jun 29, 2018

Release Notes Updates after ORR
msfitzsimons
committed
4cf8733

Commits on Jul 2, 2018

Merge pull request #267 from NCIP/Kay
msfitzsimons
authored
6360fa4

Commits on Jul 12, 2018

AWG Release Notes updates
msfitzsimons
committed
85ee00d
Changed Release Date
wwysoc2
committed
8da946a

Commits on Jul 20, 2018

Merge branch 'develop' into Ichabod
msfitzsimons
committed
3f9cc6f

Commits on Jul 24, 2018

Early draft of UG for versioning
msfitzsimons
committed
33f953b
Additional updates for versioning release
msfitzsimons
committed
8a3b106

Commits on Jul 27, 2018

More updates to versioning docs
msfitzsimons
committed
7053470

Commits on Jul 30, 2018

Add release 15 portal notes
rosibaj
authored
3056ec7
Ichabod File Versioning Updates
rosibaj
authored
11aa294
Update for ichabod versioning changes
rosibaj
authored
cc1dc3a
remove link to change log
rosibaj
authored
d62009d
remove link to change log
rosibaj
authored
194b9b0
More updates for versioning
msfitzsimons
committed
e7c5a64

Commits on Jul 31, 2018

small updates to UG for versioning
msfitzsimons
committed
7393c69
Update Data_Portal_Release_Notes.md
rosibaj
authored
150e08c
Add files via upload
rosibaj
authored
11b068d
file repo screenshot update
rosibaj
authored
a4f8919
Add files via upload
rosibaj
authored
d6bbbb1
Add files via upload
rosibaj
authored
56ba9d2
update set screenshot
rosibaj
authored
0467667
Update Custom_Set_Analysis.md
rosibaj
authored
aef5d15
updated exploration screenshots
rosibaj
authored
93ec373
Add files via upload
rosibaj
authored
984c1f8
Add files via upload
rosibaj
authored
22e9da3
updated screenshots for ichabod
rosibaj
authored
63e0f73
Add files via upload
rosibaj
authored
59f3297
Add files via upload
rosibaj
authored
1df6a71
Add files via upload
rosibaj
authored
41ae62b
Add files via upload
rosibaj
authored
712ea8f
Delete GDC_SUBMIT_TO_GDC_v2.png .png
rosibaj
authored
f765231
update screenshots to request submission
rosibaj
authored
8661310

Commits on Aug 3, 2018

More Ichabod UG updates
msfitzsimons
committed
b49b7d7

Commits on Aug 7, 2018

Add files via upload
rosibaj
authored
7f1f525
Update Submit_Data.md
rosibaj
authored
79ffe42
Update Release_Data.md
rosibaj
authored
f9e4f27
Update Getting_Started.md
rosibaj
authored
37f8005
Add files via upload
rosibaj
authored
f0a78b3
Add files via upload
rosibaj
authored
8363a76
Update Release_Data.md
rosibaj
authored
e7f1040
homepage image update
rosibaj
authored
860bc6d
update with released/requested release status
rosibaj
authored
c8ac0f7

Commits on Aug 8, 2018

More updates for Ichabod
msfitzsimons
committed
eebe1ac
Updates for Ichabod
msfitzsimons
committed
78d060f

Commits on Aug 9, 2018

Updates for Ichabod
msfitzsimons
committed
ecf961f

Commits on Aug 10, 2018

More Ichabod updates
msfitzsimons
committed
aa777df

Commits on Aug 17, 2018

Versioning UG updates
msfitzsimons
committed
ae47533

Commits on Aug 20, 2018

Merge pull request #270 from NCIP/Ichabod
msfitzsimons
authored
f88095b
Revert "Merge pull request #270 from NCIP/Ichabod"
msfitzsimons
committed
fe933e6
Revert "Revert "Merge pull request #270 from NCIP/Ichabod""
msfitzsimons
committed
cd237df

Commits on Aug 21, 2018

Updated GraphiQL link
wwysoc2
committed
a460e7a
Ichabod updates
msfitzsimons
committed
42dfcb1

Commits on Aug 23, 2018

Added release dates
msfitzsimons
committed
45d4fb7

Commits on Aug 24, 2018

🐛 Make deprecated fields case-sensitive
anncatton
committed
2df371d
updated
purplepeopleeater
committed
9e28a7e
update
purplepeopleeater
committed
dc64c20
updates
purplepeopleeater
committed
038dd0f
update
purplepeopleeater
committed
1ea09e3
link update
purplepeopleeater
committed
5b2c182
update to listing of files
purplepeopleeater
committed
d36a53c
update links
purplepeopleeater
committed
161043e

Commits on Aug 27, 2018

update image and table
purplepeopleeater
committed
5709f1b

Commits on Aug 28, 2018

update formating
purplepeopleeater
committed
7bf19a8
update formating
purplepeopleeater
committed
723d08e
update
purplepeopleeater
committed
4478588
formating updates
purplepeopleeater
committed
3b7d9cf

Commits on Aug 30, 2018

Removing legacy/data endpoint references
msfitzsimons
committed
0bb6fb8
update formating
purplepeopleeater
committed
e0e12bb

Commits on Aug 31, 2018

New Data Submission Documentation: Checklist.md
svburke
committed
735e977
Revert "New Data Submission Documentation: Checklist.md"
msfitzsimons
committed
46b5069
update formating
purplepeopleeater
committed
9ca222f

Commits on Sep 4, 2018

Jibboo release notes
msfitzsimons
committed
609c3dd
update to format.
purplepeopleeater
committed
336484d
Merge branch 'Jibboo' of https://github.com/NCIP/gdc-docs into Jibboo
purplepeopleeater
committed
6b61f53

Commits on Sep 5, 2018

format updates
purplepeopleeater
committed
c6d519a
formating update
purplepeopleeater
committed
7a16de7

Commits on Sep 6, 2018

format update
purplepeopleeater
committed
c3524cc
formating update
purplepeopleeater
committed
9f09ef2
formating update
purplepeopleeater
committed
8ceebc3

Commits on Sep 10, 2018

format updates
purplepeopleeater
committed
f01f690
Merge pull request #272 from NCIP/PRTL-2180-case-sensitive-deprecated-fields
anncatton
authored
888ae48
format updates
purplepeopleeater
committed
1ed9149

Commits on Sep 11, 2018

Commits on Sep 12, 2018

reverts changes from incorrect merge PR-272
anncatton
committed
ce9d318
🐛 make deprecated fields case sensitive
anncatton
committed
88265db
Merge pull request #276 from NCIP/revert-case-sensitive-pr
anncatton
authored
5b6415c
Merge pull request #277 from NCIP/fix/PRTL-2180-case-sensitive-deprecated-fields
anncatton
authored
0fa557a
update annoatations
purplepeopleeater
committed
98d3e89
link update
purplepeopleeater
committed
9b19d2c

Commits on Sep 13, 2018

Dictionary Release Notes
cpreid2
committed
b2b9a24
Last Fix
cpreid2
committed
e613d05
CGI bam annotation
msfitzsimons
committed
2d62ea8

Commits on Sep 19, 2018

Commits on Sep 20, 2018

Updates to Release Notes
msfitzsimons
committed
8c42dab
User Guide Updates
msfitzsimons
committed
3399d6a
fixing format errors in user guides
msfitzsimons
committed
c4b9c3e
fixing format errors
msfitzsimons
committed
98c4933
format error fixes
msfitzsimons
committed
ef99678
more error fixes
msfitzsimons
committed
23b3764
more error fixes
msfitzsimons
committed
052d2c1
more error fixes
msfitzsimons
committed
56bf196
more error fixes
msfitzsimons
committed
acde8a8
more formatting errors
msfitzsimons
committed
6ec8d40
other format fixes
msfitzsimons
committed
0ae29c9
more format fixes
msfitzsimons
committed
d8072ab
more formatting issues
msfitzsimons
committed
6d6adec
more format errors
msfitzsimons
committed
7f60a04
remove TCGA MAF format from encyclopedia
msfitzsimons
committed
58d6d32
remove TCGA MAF format pages
msfitzsimons
committed
3343417
remove TCGA VCF page
msfitzsimons
committed
9044c6e
fix formatting error
msfitzsimons
committed
cc45c89
fixing format issues
msfitzsimons
committed
9ecc039

Commits on Sep 27, 2018

Release Notes Updates
msfitzsimons
committed
302727f

Commits on Sep 28, 2018

Minor fixes to release notes
msfitzsimons
committed
94e0903

Commits on Oct 3, 2018

Added known bugs that were discovered today - SNP6/SlideImages
wwysoc2
committed
0cf7254
Small typos
wwysoc2
committed
2cd2246
Added manifest for 542 files from DR13
wwysoc2
committed
c7dea7c
Uploaded actual manifest file
wwysoc2
committed
dd6f888

Commits on Oct 30, 2018

Update README.md
msfitzsimons
authored
aa9e6a9

Commits on Jun 18, 2026

NIH Data Call: inject public repository policy into SECURITY.md
raraslw-nih
committed
5e5424a