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Fixing missing function and parameters #36

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Fixing missing function and parameters #36

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3 changes: 3 additions & 0 deletions src/mapgd_0.4/commands/relatedness.h
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Original file line number Diff line number Diff line change
Expand Up @@ -87,5 +87,8 @@ newton(Relatedness &rel, std::map <Genotype_pair_tuple, size_t> &hashed_genotype
void
get_llr(Relatedness &rel, std::map <Genotype_pair_tuple, size_t> hashed_genotypes);

void
get_95CI(Relatedness &rel, std::map <Genotype_pair_tuple, size_t> hashed_genotypes);

#endif

2 changes: 1 addition & 1 deletion src/mapgd_0.4/mpi/mpi_relatedness.cc
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Expand Up @@ -168,7 +168,7 @@ int estimateRel(int argc, char *argv[])
}
if ( chunk*taskid <= z && z < chunk*(taskid+1) )
{
hashed_genotypes=hash_genotypes(file_buffer, x, y, l2o);
hashed_genotypes=hash_genotypes(file_buffer, x, y, l2o, false);
// down_genotypes=downsample_genotypes(file_buffer, x, y, l2o);
relatedness.zero();
set_e(relatedness, hashed_genotypes);
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