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1. IDHmut IDHmut Public

   Deep learning aids prediction of IDH mutation status from histopathological whole slide images (WSI)

   Python 11 2

2. MultiNEP MultiNEP Public

   MultiNEP: a Multi-omics Network Enhancement framework for Prioritizing disease genes and metabolites simultanuously

   R 2

3. WGLab/SCOTCH WGLab/SCOTCH Public

   Single-Cell Omics for Transcriptome CHaracterization (SCOTCH): isoform-level characterization of gene expression through long-read single-cell RNA sequencing

   Python 26 2

4. WGLab/PhenoSV WGLab/PhenoSV Public

   PhenoSV: Interpretable phenotype-aware model for the prioritization of genes affected by structural variants.

   Python 18 5

5. WGLab/LongAllele WGLab/LongAllele Public

   Joint inference of haplotypes and allele-specific expression from long-read bulk and single-cell RNA-seq

   Python 4