CellProfiler-plugins

A home for community-contributed and experimental CellProfiler modules.

Use

Clone this repository:

cd PLUGIN_DIRECTORY
git clone https://github.com/CellProfiler/CellProfiler-plugins.git

Configure CellProfiler plugins directory in the GUI via Preferences > CellProfiler plugins directory (you will need to restart CellProfiler for the change to take effect). When running CellProfiler via the command line, use the --plugins-directory flag to specify the plugins directory, for example:
```
cellprofiler --run --run-headless --project PROJECT_FILE --plugins-directory PLUGIN_DIRECTORY
```

Name		Name	Last commit message	Last commit date
Latest commit History 8 Commits
.gitignore		.gitignore
README.md		README.md
activecontourmodel.py		activecontourmodel.py
exporttocellh5.py		exporttocellh5.py
measure_population_context.py		measure_population_context.py