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@Common-Longitudinal-ICU-data-Format

Common Longitudinal ICU data Format (CLIF)

An open source data standard for longitudinal ICU data that enables high quality privacy-preserving multicenter research
README.md

Common Longitudinal ICU data Format (CLIF)

License

Advancing Critical Care Through Federated Research, read more at our 🌐 Website or chat with our 🤖 CLIF Assistant!

Our Repositories

🔬 Projects

  1. CLIF_rule-based-SAT-comparison
  2. CLIF_icu_readmission
  3. clif_prf_prediction
  4. clif_vent_variation
  5. CLIF_rule_based_SAT_SBT_signature
  6. CLIF-SIPA
  7. CLIF_sepsis
  8. CLIF-eligibility-for-mobilization
  9. clif_prf_itrach
  10. CLIF-epi-of-sedation
  11. CLIF-transplant-valeos
  12. CLIF_Proning_Incidence_Severe_ARF
  13. CLIF_transplant
  14. CLIF-epidemiology-of-CRRT
  15. CLIF-sipa-model-training
  16. CLIFATRON
  17. ARF-NIV_TreatmentLocation
  18. Variation in the Management of Culture-Positive Empyema
  19. The Role of Treatment Setting in Acute Respiratory Failure: A comprehensive analysis of utilization and outcomes.
  20. Variation in Antimicrobial Consumption in Critically Ill Adults
  21. FLAME-ICU
  22. Paralytic use across CLIF consortium
  23. REspiratory Failure Environmental Risk (REFER) in ICU Patients
  24. ASE Revised Thresholds for WBC and Temperature
  25. Differential Severity Classification and Prognostic Performance of PaO2/FiO2 versus SpO2/FiO2 Ratios in Acute Hypoxemic Respiratory Failure
  26. Epidemiology of Code Status Orders Across CLIF sites
  27. Resistance patterns of pseudomonas aeruginosa in critically ill adults
  28. Effect of nocturnal sedation on SBT performance and extubation

🛠️ Tools

  1. CLIFpy PyPI
  2. CLIF_cohort_identifier
  3. CLIF-Cohort-Discovery
  4. CLIF-TableOne
  5. CLIF-Lighthouse
  6. CLIF-Cohort-Dashboard

🔄 Data Pipelines

  1. CLIF-MIMIC
  2. CLIF-C2D2

Pinned Loading

  1. clifpy clifpy Public

    Python package for CLIF

    Python 8 3

  2. CLIF-Project-Template CLIF-Project-Template Public template

    This repository provides a suggested structure for a project repository suitable for CLIF projects. This structure promotes consistency, facilitates collaboration, and ensures that all essential co…

    R 2 2

  3. CLIF-MIMIC CLIF-MIMIC Public

    This repository provides the workflow and code to convert the MIMIC IV dataset into the Common Longitudinal ICU data Format (CLIF)

    Jupyter Notebook 3 12

  4. CLIF CLIF Public

    Documentation for the Common Longitudinal ICU data Format (CLIF) data standard for critical care illness research

    Jupyter Notebook 13 8

Repositories

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