This release marks the official transition of the pipeline into a standalone, pip-installable Python package (neuro-align). It provides a complete architectural foundation for out-of-core multimodal data synchronization.
Key Additions & Features
- Pip-Installable CLI: Introduced the global
neuro-alignterminal command for cross-system execution. - BIDS fMRI Integration: Added
BidsNiftiLoaderwith automated JSON sidecar parsing for Repetition Time (TR) andnibabelproxy memory management. - HDF5 Data Persistence: Implemented the
Hdf5Exporterto serialize synchronized multimodal slices (Ephys, Video, and fMRI) into.h5files for downstream PyTorch ingestion. - Professional Logging: Replaced standard terminal outputs with a timestamped Python
loggingarchitecture. - Open Source: Officially licensed under the MIT License.