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Pull requests: AI2Science/vizfold-foundation

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Pull requests list

Bump actions/checkout from 4 to 7 dependencies Pull requests that update a dependency file github_actions Pull requests that update GitHub Actions code
#80 opened Jun 19, 2026 by dependabot Bot Loading…
Attention Rollout Computation and Heatmap Visualization
#79 opened Apr 30, 2026 by philipxunwu Loading…
Combine Previous Heatmap Visualizations Implementations
#77 opened Apr 30, 2026 by BLee654 Loading…
Add Contact Map with Triangle Attention Overlay
#75 opened Apr 29, 2026 by salammurillo Loading…
added visualization adapter for offline trace integration
#74 opened Apr 29, 2026 by sherrylicodes Loading…
1
Issue #8 Visualize Intermediate Representations
#73 opened Apr 29, 2026 by SreeDan Loading…
1
Refactor visualizations into modular files and added chord diagram support
#72 opened Apr 28, 2026 by ssagili3 Loading…
1
1
Add Evoformer extraction hooks for intermediate MSA and pair representations
#71 opened Apr 28, 2026 by PranavNarala1 Loading…
1
Module Refactor
#70 opened Apr 27, 2026 by katamyra Loading…
Build Streamlit Frontend WebUI for VizFold trace visualization Issue #41
#69 opened Apr 26, 2026 by DevP1130 Loading…
4
Automate OpenFold & VizFold-Foundation HPC Setup (Fixes #5)
#68 opened Apr 25, 2026 by JeevanandanRamasamy Loading…
1
1
Create CLIs for full OpenFold pipeline
#67 opened Apr 23, 2026 by nipun-khanna Loading…
3
VizFold zarr archive for inference traces (issue 39), ksuleimanova
#65 opened Apr 14, 2026 by ksuleimanova Loading…
Zarr Archive Format for Inference Traces (Issue #39)
#62 opened Apr 13, 2026 by Rosette2237 Loading…
1
2
Archive Utils Final PR
#59 opened Mar 23, 2026 by adeshusa Loading…
Add ESMFold backend smoke test and reproducibility documentation
#58 opened Mar 22, 2026 by Mose-Kim02 Loading…
6
Boltz web runner
#57 opened Mar 20, 2026 by Vishram1123 Loading…
ESMFold Backend Inference and Tensor Extraction (Issue #43)
#54 opened Mar 9, 2026 by rohan5986 Loading…
2
Design a Standardized Archive Format for Inference Traces - Issue #39
#53 opened Mar 9, 2026 by purvikathalkar Loading…
1
Add Zarr archive and specification for ViT-MNIST inference traces (issue 39)
#52 opened Mar 9, 2026 by Rosette2237 Loading…
Offline Visualization of Inference Traces
#47 opened Mar 5, 2026 by archbilesherman Loading…
1
Issue 42: add Boltz tracing + SLURM runner + docs
#45 opened Feb 22, 2026 by ArishV1 Loading…
3
Integrate ESMFold inference backend into VizFold (structure export + metadata)
#44 opened Feb 21, 2026 by jayvenn21 Loading…
1
14
Add intermediate structure metrics module (TM-score, lDDT)
#36 opened Dec 9, 2025 by sherrylicodes Loading…
Adding top-k attention edges script
#35 opened Dec 8, 2025 by naman-goyall Loading…
5
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