colocus/docker-compose.tests.yml at main · statgen/colocus · GitHub

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networks:
  colocus-test-network:
    driver: bridge

services:
  db:
    image: postgres:18
    env_file: "envs/env.test"
    volumes:
      - type: tmpfs
        target: /var/lib/postgresql
      - ./bin/init-postgres.sh:/docker-entrypoint-initdb.d/init-db.sh
    healthcheck:
      test: ["CMD-SHELL", "pg_isready -U ${POSTGRES_USER}"]
      interval: 5s
      timeout: 5s
      retries: 5
    networks:
      - colocus-test-network

  django:
    build: .
    env_file: "envs/env.test"
    volumes:
      - "./colocus/tests/data/:/data:ro"
    ports:
      - "${UVICORN_PORT}:${UVICORN_PORT}"
    healthcheck:
      test: ["CMD", "curl", "-f", "http://localhost:${UVICORN_PORT}/api/v1/datasets/?page_size=1"]
      interval: 5s
      timeout: 5s
      retries: 5
    depends_on:
      db:
        condition: service_healthy
    networks:
      - colocus-test-network
    entrypoint: >
      /bin/bash -c '
        cp envs/env.test .env &&
        bin/entrypoint-migrate-and-load.sh &&
        uv run pytest
      '