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Rphenograph 0.99.1.9003

New features

  • S. Thomas Kelly added pruning and graphs clustering methods. This ahs been turned into calling igraph functions.

  • Etienne K. Becht added approximate HNSW nearest neighbors for speed.

  • S. Granjeaud improves the the Jaccard_coefficient function by pre-sorting nearest indices. Now the computation takes only a few seconds for a dataset of 300 k datapoints and 30 nearest neighbors.

  • Louvain is the default graph clustering method. Any functions of the (r)igraph package can be specified.

Bug fixes and minor improvements

  • EK Becht reported that some points are missing in the grap. Self loop are added in the Jaccard C code.

Rphenograph 0.99.1

Release from H. Chen who created and published this package.