Merge pull request #512 from pepkit/peppy0_50_modernize

Modernize stages -- all

Author: khoroshevskyi

.flake8

@@ -1,13 +1,15 @@
 name: Lint
 
-on:
-  pull_request:
-    branches: [ main ]
+on: [push, pull_request]
 
 jobs:
   lint:
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@v2
-      - uses: actions/setup-python@v2
-      - uses: psf/black@stable
+      - uses: actions/checkout@v6
+      - uses: actions/setup-python@v6
+        with:
+          python-version: "3.12"
+      - run: pip install ruff
+      - run: ruff check .
+      - run: ruff format --check .

.github/workflows/black.yml

@@ -6,23 +6,16 @@ on:
 
 jobs:
   cli-coverage-report:
-    strategy:
-      matrix:
-        python-version: [ "3.12" ]
-        os: [ ubuntu-latest ]
-        r: [ release ]
-    runs-on: ${{ matrix.os }}
+    runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@v5
+      - uses: actions/checkout@v6
 
-      - uses: actions/setup-python@v5
+      - uses: actions/setup-python@v6
         with:
-          python-version: '3.12'
+          python-version: "3.13"
 
-      - name: Install test dependencies
-        run: if [ -f requirements/requirements-test.txt ]; then pip install -r requirements/requirements-test.txt; fi
-
-      - run: pip install .
+      - name: Install package with test dependencies
+        run: pip install ".[test]"
 
       - name: Run tests
         run: coverage run -m pytest
@@ -37,4 +30,4 @@ jobs:
           SMOKESHOW_GITHUB_CONTEXT: coverage
           SMOKESHOW_GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
           SMOKESHOW_GITHUB_PR_HEAD_SHA: ${{ github.event.pull_request.head.sha }}
-          SMOKESHOW_AUTH_KEY: ${{ secrets.SMOKESHOW_AUTH_KEY }}
+          SMOKESHOW_AUTH_KEY: ${{ secrets.SMOKESHOW_AUTH_KEY }}

.github/workflows/cli-coverage.yml

@@ -11,25 +11,19 @@ jobs:
     runs-on: ${{ matrix.os }}
     strategy:
       matrix:
-        python-version: ["3.11"]
+        python-version: ["3.13"]
         os: [windows-latest]
 
     steps:
-    - uses: actions/checkout@v2
+    - uses: actions/checkout@v6
 
     - name: Set up Python ${{ matrix.python-version }}
-      uses: actions/setup-python@v2
+      uses: actions/setup-python@v6
       with:
         python-version: ${{ matrix.python-version }}
 
-    - name: Install all dependencies
-      run: pip install -r requirements/requirements-all.txt
-
-    - name: Install test dependencies
-      run: pip install -r requirements/requirements-test.txt
-
-    - name: Install package
-      run: python -m pip install .
+    - name: Install package with test dependencies
+      run: python -m pip install ".[test]"
 
     - name: Run pytest tests
-      run: pytest tests -v
+      run: pytest tests -v

.github/workflows/pytest-windows.yml

@@ -11,25 +11,19 @@ jobs:
     runs-on: ${{ matrix.os }}
     strategy:
       matrix:
-        python-version: ["3.9", "3.13"]
+        python-version: ["3.10", "3.13"]
         os: [ubuntu-latest]
 
     steps:
-    - uses: actions/checkout@v5
+    - uses: actions/checkout@v6
 
     - name: Set up Python ${{ matrix.python-version }}
-      uses: actions/setup-python@v5
+      uses: actions/setup-python@v6
       with:
         python-version: ${{ matrix.python-version }}
 
-    - name: Install all dependencies
-      run: if [ -f requirements/requirements-all.txt ]; then pip install -r requirements/requirements-all.txt; fi
-
-    - name: Install test dependencies
-      run: if [ -f requirements/requirements-test.txt ]; then pip install -r requirements/requirements-test.txt; fi
-
-    - name: Install package
-      run: python -m pip install .
+    - name: Install package with test dependencies
+      run: python -m pip install ".[test]"
 
     - name: Run pytest tests
       run: pytest tests -v

.github/workflows/pytest.yml

@@ -6,22 +6,21 @@ on:
 
 jobs:
   deploy:
-    name: upload release to PyPI
     runs-on: ubuntu-latest
+    name: upload release to PyPI
     permissions:
+      contents: read
       id-token: write
+
     steps:
     - uses: actions/checkout@v6
     - name: Set up Python
       uses: actions/setup-python@v6
       with:
         python-version: '3.x'
-    - name: Install dependencies
-      run: |
-        python -m pip install --upgrade pip
-        pip install setuptools wheel twine
-    - name: Build and publish
-      run: |
-        python setup.py sdist bdist_wheel
+    - name: Install build dependencies
+      run: python -m pip install --upgrade pip build
+    - name: Build package
+      run: python -m build
     - name: Publish package distributions to PyPI
-      uses: pypa/gh-action-pypi-publish@release/v1
+      uses: pypa/gh-action-pypi-publish@release/v1