In order to get the technical reads from scATAC experiments, I need to use fasterq-dump --split-files --include-technical <SRR>.
But I can't control this through sraconvert, so it's just using vanilla fasterq-dump.
Need to have a way to configure that.
In order to get the technical reads from scATAC experiments, I need to use
fasterq-dump --split-files --include-technical <SRR>.But I can't control this through sraconvert, so it's just using vanilla fasterq-dump.
Need to have a way to configure that.