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Package ‘Nozzle.R1’ was removed from the CRAN repository. #30

Description

@ward

As far as I can tell, this is the repository for the Nozzle.R1 package, apologies if reporting in the wrong place.

Nozzle.R1 is no longer on CRAN. Its CRAN page has the following message

Package ‘Nozzle.R1’ was removed from the CRAN repository.

Formerly available versions can be obtained from the archive.

Archived on 2025-07-10 as issues were not corrected despite reminders.

A summary of the most recent check results can be obtained from the check results archive.

Please use the canonical form https://cran.r-project.org/package=Nozzle.R1 to link to this page.


I will be verbose enough with the errors I encountered in hopes that someone else encountering these and being confused can easily find this when searching the internet for it.

I encountered this on R version 4.5. Downgrading to R version 4.4 did allow me to still install this package.

> install.packages("Nozzle.R1")
Installing package into ‘/usr/local/lib/R/site-library’
(as ‘lib’ is unspecified)
Warning message:
package ‘Nozzle.R1’ is not available for this version of R

A version of this package for your version of R might be available elsewhere,
see the ideas at
https://cran.r-project.org/doc/manuals/r-patched/R-admin.html#Installing-packages

and also when trying to install through BiocManager

> BiocManager::install("Nozzle.R1", ask=FALSE)
[...]
Installing package(s) 'Nozzle.R1'
 Warning message:
package ‘Nozzle.R1’ is not available for Bioconductor version '3.21'

A version of this package for your version of R might be available elsewhere,
see the ideas at
https://cran.r-project.org/doc/manuals/r-patched/R-admin.html#Installing-packages

Specifically, Nozzle.R1 is a dependency of the ChIPQC package, which is what I was actually trying to install.

> BiocManager::install("ChIPQC", ask=FALSE)
[...]
Bioconductor version 3.21 (BiocManager 1.30.26), R 4.5.1 (2025-06-13)                                                   
Installing package(s) 'ChIPQC'                                                                                          
Warning: dependency ‘Nozzle.R1’ is not available
[...]

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