Run models #40
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| name: Run models | |
| on: | |
| workflow_dispatch: | |
| inputs: | |
| dockerImage: | |
| description: "Specific container image to use for build (will override the default of `nextstrain build`)" | |
| required: false | |
| type: string | |
| jobs: | |
| run_models: | |
| permissions: | |
| id-token: write | |
| uses: nextstrain/.github/.github/workflows/pathogen-repo-build.yaml@master | |
| secrets: inherit | |
| with: | |
| runtime: aws-batch | |
| run: | | |
| nextstrain build \ | |
| --aws-batch \ | |
| --detach \ | |
| --no-download \ | |
| --cpus 16 \ | |
| --memory 32GiB \ | |
| --env AWS_DEFAULT_REGION \ | |
| --env GITHUB_RUN_ID \ | |
| . \ | |
| --configfile config/defaults.yaml config/optional.yaml \ | |
| --keep-going | |
| env: | | |
| NEXTSTRAIN_DOCKER_IMAGE: ${{ inputs.dockerImage }} | |
| GITHUB_RUN_ID: ${{ github.run_id }} |