changes need to be made to:
line 61, 73, 74
with open(args.input_txt, 'rb') as infile:
to
with open(args.input_txt, 'r') as infile:
with open(args.input_maf, 'rb') as infile:
to
with open(args.input_maf, 'r') as infile:
with open(args.output_maf, 'wb') as outfile:
to
with open(args.output_maf, 'w') as outfile:
and confirm that this still works in python2.7
similarly, all scripts should be ported to python3 ideally
changes need to be made to:
line 61, 73, 74
with open(args.input_txt, 'rb') as infile:to
with open(args.input_txt, 'r') as infile:with open(args.input_maf, 'rb') as infile:to
with open(args.input_maf, 'r') as infile:with open(args.output_maf, 'wb') as outfile:to
with open(args.output_maf, 'w') as outfile:and confirm that this still works in python2.7
similarly, all scripts should be ported to python3 ideally