fix in the documentation (missing modules)

Author: tgastine

doc/magic_manual.pdf

@@ -79,3 +79,8 @@ IO: RMS force balance, torsional oscillations, misc
 -----------------------
 
 .. f:automodule:: nl_special_calc
+
+``probes.f90``
+--------------
+
+.. f:automodule:: probe_mod

doc/sphinx/apiFortran/IOAdd.rst

@@ -38,11 +38,6 @@ Base modules
 
 .. f:automodule:: fieldslast
 
-``mat.f90``
------------
-
-.. f:automodule:: matrices 
-
 ``output_data.f90``
 -------------------
 

doc/sphinx/apiFortran/baseModules.rst

@@ -8,6 +8,11 @@ Useful additional libraries
 
 .. f:automodule:: useful
 
+``mem_alloc.f90``
+------------------
+
+.. f:automodule:: mem_alloc
+
 ``char_manip.f90``
 ------------------
 

doc/sphinx/apiFortran/misc.rst

@@ -13,6 +13,11 @@ Linear calculation part of the time stepping (LMLoop)
 
 .. f:automodule:: updatewps_mod
 
+``updateWPT.f90``
+-----------------
+
+.. f:automodule:: updatewpt_mod
+
 ``updateWP.f90``
 ----------------
 

doc/sphinx/apiFortran/timeAdvLinear.rst

@@ -64,9 +64,9 @@
 # built documents.
 #
 # The short X.Y version.
-version = '5.4'
+version = '5.5'
 # The full version, including alpha/beta/rc tags.
-release = '5.4'
+release = '5.5'
 
 # The language for content autogenerated by Sphinx. Refer to documentation
 # for a list of supported languages.

doc/sphinx/conf.py

@@ -38,6 +38,6 @@ module constants
    real(cp), parameter :: cos36=cos(36.0_cp*pi/180.0_cp) ! :math:`\cos{36\pi/180}`
    real(cp), parameter :: cos72=cos(72.0_cp*pi/180.0_cp) ! :math:`\cos{72\pi/180}`
 
-   character(len=4), parameter :: codeVersion='5.4'
+   character(len=4), parameter :: codeVersion='5.5'
 
 end module constants