Thanks for creating and maintaining these fantastic tools!
Is there any way to obtain a dataframe or any data structure to relate the clusters, and the words that would be displayed in the heatmap?
`
mat = GO_similarity(all_results$GOID)
a <- simplifyGO(mat,max_words = 30)
`
I would like to have something like:
head(a)
id cluster
1 GO:0002181 1
2 GO:0015980 1
3 GO:0006412 1
4 GO:0006091 1
5 GO:1901566 1
6 GO:0045333 1
and:
cluster keywords
1 process metabolic catabolic ubiquitindependent
2 localization transport establishment nucleus
3 development morphogenesis
Thanks for creating and maintaining these fantastic tools!
Is there any way to obtain a dataframe or any data structure to relate the clusters, and the words that would be displayed in the heatmap?
`
mat = GO_similarity(all_results$GOID)
a <- simplifyGO(mat,max_words = 30)
`
I would like to have something like:
head(a)
id cluster
1 GO:0002181 1
2 GO:0015980 1
3 GO:0006412 1
4 GO:0006091 1
5 GO:1901566 1
6 GO:0045333 1
and:
cluster keywords
1 process metabolic catabolic ubiquitindependent
2 localization transport establishment nucleus
3 development morphogenesis