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feat: support vector notation for length in note.json #274
Workflow file for this run
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| # This workflow uses actions that are not certified by GitHub. | |
| # They are provided by a third-party and are governed by | |
| # separate terms of service, privacy policy, and support | |
| # documentation. | |
| # | |
| # See https://github.com/r-lib/actions/tree/master/examples#readme for | |
| # additional example workflows available for the R community. | |
| name: main | |
| on: | |
| pull_request: | |
| types: [opened, reopened, closed, synchronize] | |
| workflow_call: | |
| inputs: | |
| USERNAME: | |
| required: true | |
| type: string | |
| PACKAGE_NAME: | |
| required: true | |
| type: string | |
| BRANCH_NAME: | |
| required: true | |
| type: string | |
| COMMIT_HASH: | |
| required: true | |
| type: string | |
| COMMIT_MSG: | |
| required: true | |
| type: string | |
| secrets: | |
| PRIVATE_ACCESS_TOKEN: | |
| required: true | |
| GDRGENESIS_TRIGGER_TOKEN: | |
| required: true | |
| GDRVIZ_TRIGGER_TOKEN: | |
| required: true | |
| jobs: | |
| package_test: | |
| runs-on: ubuntu-24.04 | |
| if: github.event.pull_request.merged == false | |
| env: | |
| TEST_TAG: user/app:latest-${{ github.sha }} | |
| USERNAME: ${{ github.actor }} | |
| PACKAGE_NAME: ${{ github.event.repository.name }} | |
| BRANCH_NAME: ${{ github.head_ref }} | |
| BASE_IMAGE: marcinkam/gdrshiny:0.11 | |
| steps: | |
| - uses: tspascoal/get-user-teams-membership@v1 | |
| id: checkUserMember | |
| with: | |
| username: ${{ env.USERNAME }} | |
| team: 'PR reviewers' | |
| GITHUB_TOKEN: ${{ secrets.PRIVATE_ACCESS_TOKEN }} | |
| ########################## | |
| # External collaborators # | |
| ########################## | |
| - if: ${{ steps.checkUserMember.outputs.isTeamMember == 'false' }} | |
| name: Checkout | |
| uses: actions/checkout@v2 | |
| - if: ${{ steps.checkUserMember.outputs.isTeamMember == 'false' }} | |
| name: Set up Docker Buildx | |
| uses: docker/setup-buildx-action@v1 | |
| - if: ${{ steps.checkUserMember.outputs.isTeamMember == 'false' }} | |
| name: Build | |
| uses: docker/build-push-action@v2 | |
| with: | |
| context: . | |
| load: true | |
| tags: ${{ env.TEST_TAG }} | |
| build-args: | | |
| GITHUB_TOKEN=${{ secrets.PRIVATE_ACCESS_TOKEN }} | |
| BASE_IMAGE=${{ env.BASE_IMAGE }} | |
| - if: ${{ steps.checkUserMember.outputs.isTeamMember == 'false' }} | |
| name: Run tests | |
| run: | | |
| docker run -v `pwd`:/mnt/vol ${{ env.TEST_TAG }} bash -c 'bash /mnt/vol/rplatform/run_tests.sh /mnt/vol/' | |
| ################## | |
| # User from Gene # | |
| ################## | |
| - if: ${{ steps.checkUserMember.outputs.isTeamMember == 'true' }} | |
| name: Wait for test results | |
| run: | | |
| curl -s -X POST \ | |
| -F token=${{ secrets.GDRGENESIS_TRIGGER_TOKEN }} \ | |
| -F ref=main \ | |
| -F "variables[PACKAGE_NAME]=${{ env.PACKAGE_NAME }}" \ | |
| -F "variables[BRANCH_NAME]=${{ env.BRANCH_NAME }}" \ | |
| "https://code.roche.com/api/v4/projects/167859/trigger/pipeline" | |
| exit 1 | |
| deploy-dev: | |
| if: github.event.pull_request.merged | |
| runs-on: ubuntu-24.04 | |
| env: | |
| BRANCH_NAME: ${{ github.head_ref }} | |
| COMMIT_HASH: ${{ github.sha }} | |
| COMMIT_MSG: ${{ github.event.head_commit.message }} | |
| steps: | |
| - run: | | |
| curl -s -X POST \ | |
| -F token=${{ secrets.GDRVIZ_TRIGGER_TOKEN }} \ | |
| -F ref=main \ | |
| -F "variables[SOURCE_BRANCH]=${{ env.BRANCH_NAME }}" \ | |
| -F "variables[COMMIT_HASH]=${{ env.COMMIT_HASH }}" \ | |
| -F "variables[COMMIT_MSG]=${{ env.COMMIT_MSG }}" \ | |
| -F "variables[TESTS_RESULT]=SUCCESSFUL" \ | |
| "https://code.roche.com/api/v4/projects/181632/trigger/pipeline" |