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<!Doctype html>
<html>
<head>
<meta charset="UTF-8" />
<title>Seqphase</title>
<link rel="stylesheet" href="style.css"/>
</head>
<body>
<a href="https://github.com/eeg-ebe/SeqPHASE">
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</svg>
</a>
<div class="contentdiv">
<h1>SeqPHASE</h1>
<p id="cite">Flot (2010) <strong>SeqPHASE: a web tool for interconverting PHASE input/output files and FASTA sequence alignments </strong> <em>Molecular Ecology Ressources</em> <strong>10</strong> (1): 162-166 [<a href="http://dx.doi.org/10.1111/j.1755-0998.2009.02732.x">link</a>]</p><br>
<div class="navigation">
<a href="index.html">Back to startpage</a>
<a href="faq.html">Frequently asked questions</a>
<a href="mailto: jflot@ulb.ac.be">E-Mail the author</a>
</div>
<h2>Download, install and run SeqPHASE locally</h2>
<ol>
<li>Have a <u>modern webbrower</u> installed (one that supports the HTML 5 standard).</li>
<li><u>Download</u> <a href="https://github.com/eeg-ebe/SeqPHASE/archive/gh-pages.zip">this zip file</a>.</li>
<li><u>Decompress</u> the downloaded zip file to a folder of your choice.</li>
</ol>
<p>You are done. Apart from some other files the zip archive contains a file named
<i>index.html</i>. Simply open this decompressed file in your modern webbrowser in order to
launch the program.</p>
<p>In order to run SeqPHASE from commandline, you can either use these old perl scripts
<a href="seqphase1.pl">seqphase1.pl</a> / <a href="seqphase2.pl">seqphase2.pl</a> or
the newer python 3 scripts <a href="seqphase1.py">seqphase1.py</a> /
<a href="seqphase2.py">seqphase2.py</a>. The zip files also contains these python/perl files.</p>
</div>
</body>
</html>