Adding new GD plots

[nsheff]

Now that new plots have been added to GD, we need to add the plots here:

• peak width qthist
• gc content
• tissue specificity
• FRIF

[joseverdezoto]

GCContent plots are indeed included. With the most recent dev branch of GD, it's possible to plot more than one regionset.

[nsheff]

Ok but that's not useful for bedstat which treats just individual files. Can you add the other 3 new plots? It should be possible to do the tissue specificity and peak width ones, and @jpsmith5 will shortly have the FRIF ones ready as well.

[joseverdezoto]

Sounds good. I’ll get to it tomorrow or over the weekend.

[joseverdezoto]

@nsheff do we also want to include the expected and cumulative partition distribution plots? Currently bedstat includes only the raw partition distribution.

[xuebingjie1990]

@nsheff I think all the GD plots are included. should this issue be closed?

[nsheff]

@joseverdezoto can you close this issue if it's complete?

[nsheff]

@joseverdezoto pinging again. can you look into this?

[xuebingjie1990]

add more plots with the new GenomicDistributions