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Cleaning up code comments #28

Description

@annahuynhly

This is for comment clean-up.

Need to make sure the following are done:

  1. Remove REDUNDANT documentation comments between the .R files in the R folder and the .Rd files in the man folder. Most comments for USER facing functions should be reserved for the R documentation.
  2. Note that we are not using roxygen at all for lme4. Hence, having 'proper' roxygen formatting actually runs the risk of accidentally overwriting the ?modular documentation at some point. So, ensure that there are no roxygen comments that can be used to overrun.
  3. Let's keep relevant roxygen comments used to help explain some of the documentation of the internal functions (i.e., things in utilities). One quick check is that if the function doesn't have a dedicated .Rd file in the man folder, it's likely an internal function and can be left alone (except for again, making sure it's not too proper so nothing gets completely overrun by accident.)

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