CNuge triggered CI run with event push for branch refs/heads/main #17

	name: ContiniousIntegrationChecks
	run-name: ${{ github.actor }} triggered CI run with event ${{ github.event_name }} for branch ${{ github.ref }}
	on:
	push:
	branches: [ main, ci_add]
	pull_request:
	branches_ignore: []
	permissions:
	id-token: write
	contents: read # This is required for actions/checkout
	jobs:
	fullCI:
	defaults:
	run:
	shell: bash -l {0}
	name: CI test
	runs-on: ubuntu-latest
	steps:
	- run: echo "The job was automatically triggered by a ${{ github.event_name }} event."
	- run: echo "The name of your branch is ${{ github.ref }} and your repository is ${{ github.repository }}."
	- run: echo "The job's status is ${{ job.status }}."
	- name: Git clone the repository
	uses: actions/checkout@v4
	- name: Set up R env
	uses: r-lib/actions/setup-r@v2
	- name: Set up conda
	uses: conda-incubator/setup-miniconda@v3
	with:
	auto-activate-base: false
	python-version: 3.12
	channels: bioconda, conda-forge, defaults
	- name: Conda create env and install dependencies
	shell: bash -l {0}
	run: \|
	conda create -n test_r r-base r-devtools r-testthat
	conda activate test_r
	Rscript -e "testthat::test_local()"

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