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Description
Base Information
Distributor ID: Debian
Description: Debian GNU/Linux 11 (bullseye)
Release: 11
Codename: bullseye
Python 3.7.12
snakemake 8.20.6
call
./modr install --ref-path /mypath/software/ngs/BioinfCore/modr_auxilaries/ --force --threads 12
output:
./modr install --ref-path /mypath/software/ngs/BioinfCore/modr_auxilaries/ --force --threads 12
modr (0.6.1)
Merging chunks...
Extracting tarball... /mypath/software/ngs/BioinfCore/modr_auxilaries/merged_chunks.tar.gz
Traceback (most recent call last):
File "/mypath/software/package/miniconda3/lib/python3.7/shutil.py", line 932, in _unpack_tarfile
tarobj = tarfile.open(filename)
File "/mypath/software/package/miniconda3/lib/python3.7/tarfile.py", line 1580, in open
raise ReadError("file could not be opened successfully")
tarfile.ReadError: file could not be opened successfully
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "./modr", line 1236, in <module>
main()
File "./modr", line 1232, in main
args.func(args)
File "./modr", line 360, in install
unpack_archive(tarball, sub_args.ref_path)
File "/mypath/software/package/miniconda3/lib/python3.7/shutil.py", line 1002, in unpack_archive
func(filename, extract_dir, **kwargs)
File "/mypath/software/package/miniconda3/lib/python3.7/shutil.py", line 935, in _unpack_tarfile
"%s is not a compressed or uncompressed tar file" % filename)
shutil.ReadError: /mypath/software/ngs/BioinfCore/modr_auxilaries/merged_chunks.tar.gz is not a compressed or uncompressed tar file
checking the download
ls -ahl
drwxrwxr-x+ 2 ID group 42 Oct 11 15:50 .
drwxrwxr-x+ 16 ID group 4.0K Oct 11 15:48 ..
-rw-rw-r--+ 1 ID group 0 Oct 11 16:30 merged_chunks.tar.gz
I could not find a hint where this should be pulled from, the install.json does not contain much.
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