Merge pull request #68 from ODM2/fixqueries

Fixqueries

Author: Stephanie Reeder

.cache/v/cache/lastfailed

@@ -0,0 +1,16 @@
+{
+  "tests/test_SessionFactory.py::test_aSessionFactory[setup4]": true, 
+  "tests/test_SessionFactory.py::test_aSessionFactory[setup5]": true, 
+  "tests/test_SessionFactory.py::test_aSessionFactory[setup6]": true, 
+  "tests/test_connection.py::test_connection[setup2]": true, 
+  "tests/test_connection.py::test_connection[setup3]": true, 
+  "tests/test_odm2/test_createservice.py::TestCreateService::()::test_createTimeSeriesResult": true, 
+  "tests/test_odm2/test_model.py::test_cvelevationdatum[setup2]": true, 
+  "tests/test_odm2/test_model.py::test_cvelevationdatum[setup3]": true, 
+  "tests/test_odm2/test_model.py::test_cvsamplingfeatuergeotype[setup2]": true, 
+  "tests/test_odm2/test_model.py::test_cvsamplingfeatuergeotype[setup3]": true, 
+  "tests/test_odm2/test_model.py::test_cvsamplingfeaturetype[setup2]": true, 
+  "tests/test_odm2/test_model.py::test_cvsamplingfeaturetype[setup3]": true, 
+  "tests/test_odm2/test_model.py::test_sampling_feature[setup2]": true, 
+  "tests/test_odm2/test_model.py::test_sampling_feature[setup3]": true
+}

.gitignore

@@ -1,6 +1,6 @@
 *.py[cod]
 *~
-.ipynb_checkpoints
+
 
 #  C extensions
 *.so
@@ -40,7 +40,9 @@ nosetests.xml
 
 log
 *.log
-.idea
+
 
 .DS_Store
 .ipynb_checkpoints
+.cache
+.idea

.travis.yml

@@ -1,4 +1,4 @@
-language: python
+git blanguage: python
 sudo: required
 # if the https://travis-ci.org/ODM2/ODM2PythonAPI/requests ever says: missing config
 # validate at: http://lint.travis-ci.org/
@@ -38,17 +38,19 @@ addons:
       - libspatialite-dev
 #  mariadb: '10.1'
 before_script:
-  - ./scripts/mysql_setup.sh
-  - ./scripts/postgres_setup.sh
-  - ./scripts/freetds.sh
+  - ./ci-helpers/mysql_setup.sh
+  - ./ci-helpers/postgres_setup.sh
+  - ./ci-helpers/travis/freetds.sh
+
 
 before_install:
 # python -m pip makes the install go into the virtualenv
-  - python -m pip install pandas
+  - sudo pip install --upgrade pip
+  - sudo python -m pip install pandas
   - export PYMSSQL_BUILD_WITH_BUNDLED_FREETDS=1;python -m  pip install pymssql
 #  - python -m  pip install mysql-python
 install: # now just our code
-  - pip install git+https://github.com/ODM2/geoalchemy.git@odm2#egg=geoalchemy-0.7.3
+  - pip install -e git+https://github.com/ODM2/geoalchemy.git@v0.7.4#egg=geoalchemy-0.7.4
   - pip install   .
   - pip install  -r requirements_tests.txt  --allow-external pyodbc --allow-unverified pyodbc
     # pysqlite

Examples/Sample.py

@@ -2,8 +2,8 @@
 
 
 
-import matplotlib.pyplot as plt
-from matplotlib import dates
+# import matplotlib.pyplot as plt
+
 
 
 
@@ -17,10 +17,11 @@
 #connect to database
 # createconnection (dbtype, servername, dbname, username, password)
 # session_factory = dbconnection.createConnection('connection type: sqlite|mysql|mssql|postgresql', '/your/path/to/db/goes/here', 2.0)#sqlite
-# session_factory = dbconnection.createConnection('mysql', 'localhost', 'odm2', 'ODM', 'odm')#mysql
+session_factory = dbconnection.createConnection('mysql', 'localhost', 'odm2', 'ODM', 'odm')#mysql
 # session_factory= dbconnection.createConnection('mssql', "(local)", "LBRODM2", "ODM", "odm")#win MSSQL
-session_factory= dbconnection.createConnection('mssql', "arroyoodm2", "", "ODM", "odm")#mac/linux MSSQL
-# session_factory = dbconnection.createConnection('sqlite', '/Users/Stephanie/Desktop/TestODM2.db', 2.0)
+# session_factory= dbconnection.createConnection('mssql', "arroyoodm2", "", "ODM", "odm")#mac/linux MSSQL
+# session_factory = dbconnection.createConnection('sqlite', '/Users/stephanie/DEV/ODM2/usecases/WOF_to_ODM2/ODM2.sqlite', 2.0)
+
 
 
 
@@ -60,7 +61,7 @@
     siteFeatures = read.getSamplingFeatures()
     # siteFeatures = read.getSamplingFeatures(type='Site')
     numSites = len(siteFeatures)
-
+    print ("Successful query")
     for x in siteFeatures:
         print(x.SamplingFeatureCode + ": " + x.SamplingFeatureTypeCV )
 except Exception as e:
@@ -69,7 +70,7 @@
 
 # Now get the SamplingFeature object for a SamplingFeature code
 try:
-    sf = read.getSamplingFeatures(code=['USU-LBR-Mendon'])[0]
+    sf = read.getSamplingFeatures(codes=['USU-LBR-Mendon'])[0]
     print(sf)
     print("\n-------- Information about an individual SamplingFeature ---------")
     print("The following are some of the attributes of a SamplingFeature retrieved using getSamplingFeatureByCode(): \n")
@@ -88,13 +89,13 @@
     # from odm2api.ODM2.models import SamplingFeatures
     session = session_factory.getSession()
     newsf = Sites(FeatureGeometryWKT = "POINT(-111.946 41.718)", Elevation_m=100, ElevationDatumCV=sf.ElevationDatumCV,
-    SamplingFeatureCode= "TestSF",SamplingFeatureDescription = "this is a test to add Feature Geomotry",
+    SamplingFeatureCode= "TestSF",SamplingFeatureDescription = "this is a test in sample.py",
     SamplingFeatureGeotypeCV= "Point", SamplingFeatureTypeCV=sf.SamplingFeatureTypeCV,SamplingFeatureUUID= sf.SamplingFeatureUUID+"2",
     SiteTypeCV="cave", Latitude= "100", Longitude= "-100", SpatialReferenceID= 0)
 
-    create.createSamplingFeature(newsf)
+    c=create.createSamplingFeature(newsf)
     #session.commit()
-    print("new sampling feature added to database", newsf)
+    print("new sampling feature added to database", c)
 
 except Exception as e :
     print("error adding a sampling feature: " + str(e))

Forms/clsDBConfig.py

@@ -115,6 +115,9 @@ def __init__( self, parent ):
 		self.btnTest.Bind( wx.EVT_BUTTON, self.OnBtnTest )
 		self.btnSave.Bind( wx.EVT_BUTTON, self.OnBtnSave )
 		self.btnCancel.Bind( wx.EVT_BUTTON, self.OnBtnCancel )
+
+		self.btnTest.SetFocus()
+
 
 	def __del__( self ):
 		pass

Forms/frmDBConfig.py

@@ -78,6 +78,7 @@ def validateInput(self, conn_dict):
             if self.service_manager.test_connection(conn_dict):
                 message = "This connection is valid"
                 wx.MessageBox(message, 'Test Connection', wx.OK)
+                self.btn
             else:
                 #TODO add error message if user cannont connect to the database ( not using VPN) but the db is still 1.1.1)
                 if not (self.service_manager.get_db_version(conn_dict)):