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docs: Add music modulation exploratory study documentation (N=2 pilot)#2

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Mythmaker28 merged 6 commits into
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feature/music-modulation-case-study
Oct 23, 2025
Merged

docs: Add music modulation exploratory study documentation (N=2 pilot)#2
Mythmaker28 merged 6 commits into
mainfrom
feature/music-modulation-case-study

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  • MUSIC_CASE_STUDY_DRAFT.md: Full draft Case Study 6 (1200+ lines, 10 sections)

    • Background & rationale (set & setting gap for κ-opioid)
    • Preliminary observations (N=2, qualitative)
    • Mechanisms: theta-entrainment, path dependency, contextual priming
    • Full RCT protocol (N=24, budget )
    • Decision criteria for integration (N10 for Case Study, N5 for Brief Report)
  • MUSIC_SESSION_TEMPLATE.md: Standardized data collection form (400 lines)

    • Pre/during/post measures
    • PARI calculation
    • Safety tracking
  • MUSIC_INTEGRATION_INSTRUCTIONS.md: Step-by-step guide for AI agents (800 lines)

    • 7-phase integration protocol
    • Decision flowchart (when to integrate vs Brief Report vs wait)
    • Quality control checklist
  • MUSIC_INTEGRATION_FAQ.md: 22 common questions (600 lines)

    • Scientific, practical, technical answers
    • Statistical methods, reference formatting
  • README.md: Overview & navigation

Status: EXPLORATORY (not part of v1.1)
Target: v1.2 (2026) or separate Brief Report when N10 Keeps main framework pristine (92/100)

- MUSIC_CASE_STUDY_DRAFT.md: Full draft Case Study 6 (1200+ lines, 10 sections)
  * Background & rationale (set & setting gap for κ-opioid)
  * Preliminary observations (N=2, qualitative)
  * Mechanisms: theta-entrainment, path dependency, contextual priming
  * Full RCT protocol (N=24, budget )
  * Decision criteria for integration (N10 for Case Study, N5 for Brief Report)

- MUSIC_SESSION_TEMPLATE.md: Standardized data collection form (400 lines)
  * Pre/during/post measures
  * PARI calculation
  * Safety tracking

- MUSIC_INTEGRATION_INSTRUCTIONS.md: Step-by-step guide for AI agents (800 lines)
  * 7-phase integration protocol
  * Decision flowchart (when to integrate vs Brief Report vs wait)
  * Quality control checklist

- MUSIC_INTEGRATION_FAQ.md: 22 common questions (600 lines)
  * Scientific, practical, technical answers
  * Statistical methods, reference formatting

- README.md: Overview & navigation

Status: EXPLORATORY (not part of v1.1)
Target: v1.2 (2026) or separate Brief Report when N10
Keeps main framework pristine (92/100)
- Add tools/find_duplicates.py for detecting file duplicates
- Remove duplicate MUSIC files from _notes_personnelles/
- Add GitHub Actions CI for Python tests
- Add QUICKSTART.md for 60-second onboarding
- Update README with quick start section
- Add data_validation.py for CSV integrity checks
- Validates positive values, tau=1/k_off coherence, PMIDs
- Validates confidence levels in predictions matrix
- Fix invalid confidence level: Moderate-High -> Moderate
- Integrate validation step in CI workflow
- All validations now pass successfully
@Mythmaker28 Mythmaker28 merged commit bde72df into main Oct 23, 2025
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