-
Notifications
You must be signed in to change notification settings - Fork 6
Open
Description
I've encountered the following problem when executing demo pipeline:
Output in format: Requested package -> Available versionsThe following specifications were found to be incompatible with your system:
- feature:/linux-64::__glibc==2.33=0
- bracken==2.6.0 -> libgcc-ng[version='>=7.5.0'] -> __glibc[version='>=2.17']
- python=3.8 -> libgcc-ng[version='>=7.5.0'] -> __glibc[version='>=2.17']
Your installed version is: 2.33
The only similar issue I found in the internet was about mixture of packages from different channels. Executing following command manually fixed the error:
conda install -p vendor/conda/CAP_v2_bracken_kraken2 -c bioconda -c conda-forge bracken==2.6.0 -y
Not sure how reproducible the issue is, but you might want to look at it, since it breaks normal pipeline execution.
Reactions are currently unavailable
Metadata
Metadata
Assignees
Labels
No labels