SjTree/environment.yml at main · MCBLab/SjTree · GitHub

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name: sjtree
channels:
  - conda-forge
  - bioconda
  - defaults
  - salilab
dependencies:
  - _openmp_mutex=4.5
  - ca-certificates=2026.2.25
  - ld_impl_linux-64=2.45.1
  - libffi=3.2.1
  - libgcc=15.2.0
  - libgcc-ng=15.2.0
  - libgomp=15.2.0
  - liblzma=5.8.2
  - liblzma-devel=5.8.2
  - libsqlite=3.46.0
  - libstdcxx=15.2.0
  - libstdcxx-ng=15.2.0
  - libzlib=1.2.13
  - ncurses=6.5
  - openssl=1.1.1w
  - pip=24.3.1
  - python=3.8.0
  - readline=8.3
  - setuptools=75.3.0
  - sqlite=3.46.0
  - tk=8.6.13
  - wheel=0.45.1
  - xz=5.8.2
  - xz-gpl-tools=5.8.2
  - xz-tools=5.8.2
  - zlib=1.2.13
  - pip:
      - blis==0.4.1
      - catalogue==1.0.2
      - certifi==2026.2.25
      - charset-normalizer==3.4.4
      - colorama==0.4.4
      - contourpy==1.1.1
      - cycler==0.12.1
      - cymem==2.0.11
      - enum34==1.1.10
      - fonttools==4.57.0
      - idna==3.11
      - importlib-resources==6.4.5
      - joblib==0.16.0
      - kiwisolver==1.4.7
      - matplotlib==3.7.5
      - murmurhash==1.0.15
      - numpy==1.20.0
      - packaging==26.0
      - pandas==1.1.1
      - pandas-ml==0.6.1
      - pillow==7.0.0
      - plac==1.1.3
      - plotly==4.11.0
      - preshed==3.0.12
      - pyfiglet==0.8.post1
      - pyparsing==3.1.4
      - python-dateutil==2.9.0.post0
      - pytz==2026.1.post1
      - requests==2.32.4
      - retrying==1.4.2
      - scikit-learn==0.23.2
      - scipy==1.9.3
      - six==1.17.0
      - spacy==2.3.2
      - srsly==1.0.7
      - termcolor==1.1.0
      - thinc==7.4.1
      - threadpoolctl==3.5.0
      - tqdm==4.67.3
      - urllib3==2.2.3
      - wasabi==0.10.1
      - xgboost==1.2.0
      - zipp==3.20.2