Add Dockerfile using micromamba; install pipeline env (envs/base.yml/r.yml) and Snakemake.
- Copy repo into
/app; default CMD starts the FastAPI server.
- Document docker
build/run (-p 8000:8000).
Acceptance criteria:
- Pipeline can be driven via the containerized API/UI.
Add
Dockerfileusing micromamba; install pipeline env (envs/base.yml/r.yml) and Snakemake./app; defaultCMDstarts the FastAPI server.build/run(-p 8000:8000).Acceptance criteria: