The attached .squid file contains data for 5 samples (+ RM). One of them is sample 1242, another is 12429. Both of these sample names are followed by a - delimiter. Squid3 does not recognize this right away. Instead it seems to group both samples that start with 1242 into one. I then have to go in and break up further (which is easy to miss) and ends up just using # of characters (aka 1242- vs 12429) to define. Its a bit deceptive/confusing since it is not working with the delimiter as I would expect and thus not being consistent with the naming (some with hyphens, some without).
I'm not sure what the fix is (or if worthwhile), since the first pass at sorting samples is by consistency of characters...

980_1_2021_Jul_13_15.33.zip
The attached .squid file contains data for 5 samples (+ RM). One of them is sample 1242, another is 12429. Both of these sample names are followed by a - delimiter. Squid3 does not recognize this right away. Instead it seems to group both samples that start with 1242 into one. I then have to go in and break up further (which is easy to miss) and ends up just using # of characters (aka 1242- vs 12429) to define. Its a bit deceptive/confusing since it is not working with the delimiter as I would expect and thus not being consistent with the naming (some with hyphens, some without).
I'm not sure what the fix is (or if worthwhile), since the first pass at sorting samples is by consistency of characters...
980_1_2021_Jul_13_15.33.zip